RNA id: TCONS_00008310


Basic Information

Item Value
RNA id TCONS_00008310
length 1083
RNA type mRNA
GC content 0.51
exon number 10
gene id XLOC_004391
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 44452233 ~ 44485762 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCATGACAGGATAGGATTTAACATAATTCTGATCATTTTTCAGCTCTAATGTGAAGGCGTTGAAGTTAAGATTAACATAACAGTGTGGAAATGGAGCAGTTAGATCCCTCTCCGTTAAAGCGCTTCGTTCTGGCCAAGAAGAAGATCAGCGAAGTGTTCGAGCAGCTCCTAGTTTACGTTCAGGAGGGTTGCGAGTTTGTAAAAGAAACCTGTGCCAATGAGTCGTTGGAGAATATTGCCAACAAAGACCAGTTGGATGAAATCGAATCGTACACCAGCAAACTGTCCATCATTCAGGAGGTGTTGGCTCGCAGACATATGAAGGTGGCTTTCTTCGGCAGAACAAGCAATGGTAAAAGCACCGTCATCAACGCTATGCTGCGTGACCGTGTGCTGCCCAGCGGCATCGGACACACGACTAACTGCTTTCTGAGTGTGGAGGGAACAGATGAGGACAAGGCCTTTCTGAAGACTGAAGGCTCCGAGGAGGAGAAAAGCATCAAGACAGTAAATCAGCTGGCTCACGCTCTGCATATGGACGAGAGTCTGGACGCCGGCTGTCTGGTCAAAGTTTTCTGGCCCAAAACGAAGTGTGCTCTGCTCAGAGACGACCTGGTTCTGGTGGACAGTCCTGGAACTGACGTGACCACAGAGCTGGACAGCTGGATTGATAAGTTCTGTCTGGACGCTGATGTGTTTGTGTTGGTGGCGAACTCTGAATCCACACTAATGAACACGGAGAAGCATTTCTTCCACAAGGTCAATGAAAAACTTTCCAAGCCCAACATCTTCATCTTGAACAATCGCTGGGACGCTTCTGCTGCCGAACCCGAATACATGGAGGACGTGCGCAAGCAGCACACGGACCGGTGTGTGAACTTCCTGGTGGAGGAGCTGAAGGTGGTGGATCGCGCTCAGGCACCGAACCGCATTTTCTTTGTGTCGGCGAAGGAGGTGCTGAACTCGCGGATGCAGCGGGCGCAGGgaggCGCTCTCGCTGAGGGGTTTCAGGACCGACTGAAGGAGTTCCAGAACTTTGAGAGATCCTTTGAGGCAAGTGAGAAATGCGGTGGGAAAGCAAA

Function

GO:

id name namespace
GO:0008053 mitochondrial fusion biological_process
GO:0051646 mitochondrion localization biological_process
GO:0031306 intrinsic component of mitochondrial outer membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1553 Predicted to enable GTPase activity. Predicted to be involved in mitochondrial fusion and mitochondrion localization. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be intrinsic component of mitochondrial outer membrane. Orthologous to human MFN1 (mitofusin 1).

Ensembl:

ensembl_id ENSDART00000172828

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008877 lncRNA downstream 22752 44451240 ~ 44451660 (-) True XLOC_004390
TCONS_00008876 lncRNA downstream 24063 44447695 ~ 44450349 (-) True XLOC_004389
TCONS_00008875 lncRNA downstream 88663 44384814 ~ 44385749 (-) True XLOC_004387
TCONS_00008294 lncRNA downstream 354058 44100339 ~ 44120354 (-) True XLOC_004380
TCONS_00008293 lncRNA downstream 357964 44100339 ~ 44116448 (-) False XLOC_004380
TCONS_00008878 lncRNA upstream 37106 44522806 ~ 44524930 (-) True XLOC_004393
TCONS_00008314 lncRNA upstream 43870 44529570 ~ 44530479 (-) True XLOC_004394
TCONS_00008879 lncRNA upstream 116161 44601861 ~ 44603615 (-) False XLOC_004395
TCONS_00008880 lncRNA upstream 116161 44601861 ~ 44603625 (-) False XLOC_004395
TCONS_00008881 lncRNA upstream 116544 44602244 ~ 44603615 (-) True XLOC_004395
TCONS_00008305 mRNA downstream 64556 44400864 ~ 44409856 (-) True XLOC_004388
TCONS_00008304 mRNA downstream 126825 44340212 ~ 44347587 (-) True XLOC_004386
TCONS_00008302 mRNA downstream 197726 44265722 ~ 44276686 (-) False XLOC_004384
TCONS_00008311 mRNA upstream 6062 44491762 ~ 44498975 (-) False XLOC_004392
TCONS_00008312 mRNA upstream 10158 44495858 ~ 44499007 (-) True XLOC_004392
TCONS_00008313 mRNA upstream 41192 44526892 ~ 44543082 (-) False XLOC_004394
TCONS_00008315 mRNA upstream 120027 44605727 ~ 44621405 (-) False XLOC_004396
TCONS_00008316 mRNA upstream 120845 44606545 ~ 44622478 (-) False XLOC_004396
TCONS_00008303 other downstream 135192 44337157 ~ 44339220 (-) True XLOC_004385
TCONS_00008295 other downstream 350954 44123327 ~ 44123458 (-) True XLOC_004381
TCONS_00008250 other downstream 3099286 41375011 ~ 41375126 (-) True XLOC_004339
TCONS_00008244 other downstream 3390049 41078191 ~ 41084363 (-) True XLOC_004334
TCONS_00008236 other downstream 3778276 40678213 ~ 40696136 (-) True XLOC_004327
TCONS_00008317 other upstream 121151 44606851 ~ 44613734 (-) False XLOC_004396
TCONS_00008372 other upstream 945833 45431533 ~ 45435014 (-) False XLOC_004416