RNA id: AMCG00009244


Basic Information

Item Value
RNA id AMCG00009244
length 603
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00009244
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30181081 ~ 30185651 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGGCATCCTGAAGCTCTTCTCAAACGCAATGGTTCGAGTCGGCACCTTCAGATCCTACCAGGTAGTGCTGCTGCTTGCTGCTGCGCTGGCTGTGGTGGCTTTCTACTACTTTGGATCAGAGCGGCAGAACTTTTCCAGCACAACCAAGCGCATCAAAGACAGTCAGGCCAGCCAGAATGCCAACAGGAATGATGCAGACCTGTCCTCGGCCACAAAACCGGGACAGCCTGACATTCAGTCTGTCCTGGAAGACCGTGACAAAGTGAAGAGGAAAGATGGGGTGCCAGGGATTCTTCAGTATTACCATGCACTCATGATGTTCACTAAAGTGGACAAAAACAAGGGACTGCAGGAGAAGTTTCAGGTGGCCATGAAGTCCATGGTGAAGCACGGCAGATTCATGGACGGGGAGGTTTTGACTCTGCATTTTGTCAGCGACGAGCAAAGCCGAGATCTGGGGGAGAGGATGCTGCCAGACCTGTTTCGAGATGCCACCTTTCGTTATGAGAAGCACAGTAATAAGAGTTCTGGCTGTGAACTGCTCATCCAGCCCACTAATCCACTTCTCATCAGCTCTGCCATGTGGCGGAGTGGTGCTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69515 lncRNA downstream 190271 29989899 ~ 29990810 (-) False AMCG00009235
TU69510 lncRNA downstream 204812 29975629 ~ 29976269 (-) True G55610
TU69429 lncRNA downstream 418916 29759527 ~ 29762165 (-) True G55551
TU69343 lncRNA downstream 722254 29458615 ~ 29458827 (-) True G55488
TU69242 lncRNA downstream 1123840 29055713 ~ 29057241 (-) True G55404
TU69564 lncRNA upstream 50508 30236159 ~ 30236395 (-) True G55648
TU69634 lncRNA upstream 295128 30480779 ~ 30483373 (-) True G55703
TU69654 lncRNA upstream 305587 30491238 ~ 30491980 (-) True G55722
TU69697 lncRNA upstream 467261 30652912 ~ 30655021 (-) True G55760
TU69824 lncRNA upstream 623925 30809576 ~ 30816091 (-) True G55861
AMCG00009243 mRNA downstream 9551 30162420 ~ 30171530 (-) True AMCG00009243
AMCG00009242 mRNA downstream 42767 30129788 ~ 30138314 (-) True AMCG00009242
AMCG00009236 mRNA downstream 182598 29991576 ~ 29998483 (-) True AMCG00009236
AMCG00009235 mRNA downstream 190405 29977937 ~ 29990676 (-) True AMCG00009235
AMCG00009233 mRNA downstream 225311 29930106 ~ 29955770 (-) True AMCG00009233
AMCG00009240 mRNA upstream 51257 30236908 ~ 30244496 (-) True AMCG00009240
AMCG00009241 mRNA upstream 64403 30250054 ~ 30256499 (-) False AMCG00009241
AMCG00009255 mRNA upstream 308009 30493660 ~ 30515776 (-) True AMCG00009255
AMCG00009254 mRNA upstream 351199 30536850 ~ 30542295 (-) True AMCG00009254
AMCG00009253 mRNA upstream 358502 30544153 ~ 30547821 (-) True AMCG00009253
TU69394 other downstream 510744 29660960 ~ 29670337 (-) True AMCG00009229
TU69243 other downstream 1118051 29058284 ~ 29063030 (-) False AMCG00009215
TU68783 other downstream 2562992 27613598 ~ 27618089 (-) True AMCG00009165
TU68523 other downstream 3384427 26793541 ~ 26796654 (-) True G54821
TU68195 other downstream 5004703 25173677 ~ 25176378 (-) True AMCG00009100
TU69579 other upstream 64220 30249871 ~ 30254483 (-) True AMCG00009241
TU69693 other upstream 416928 30602579 ~ 30657612 (-) False AMCG00009265
TU69850 other upstream 748913 30934564 ~ 30937251 (-) True G55878
TU69860 other upstream 758716 30944367 ~ 30947211 (-) True G55881
TU69861 other upstream 787302 30972953 ~ 30985995 (-) True AMCG00009269

Expression Profile