RNA id: TU69639



Basic Information


Item Value
RNA id TU69639
length 305
lncRNA type inter_gene
GC content 0.51
exon number 3
gene id G55707
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30495543 ~ 30497604 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCTGAACATACCGGTTTGAAGGGCTGGTAGCGGCAGGTCTCGGGCATGTTGAGCACTTTGAGCTGCGCGGGCATGACACGGGCAGGGTTCTCCAGAAGCTGGAAGTTGGGCTCTGGctccttcttcttttccttctccttgtctttttccttctctttctccttctcctcatctttcttctctttctccttttctaCTTCGGTATCCACATCcatcttctcctcctctttctccttcttctccttctccttcttcttcgcCTTGGCTGTGATGGAGAGTACAGCAGTGGAGACcttctccttct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69569 lncRNA upstream 252812 30239333 ~ 30242731 (+) False G55649
TU69565 lncRNA upstream 255051 30236924 ~ 30240492 (+) True G55649
TU69568 lncRNA upstream 255051 30236924 ~ 30240492 (+) False G55649
TU69522 lncRNA upstream 273416 30142212 ~ 30222127 (+) True G55620
TU69481 lncRNA upstream 497057 29998229 ~ 29998486 (+) True G55597
TU69678 lncRNA downstream 101870 30599474 ~ 30600234 (+) False G55745
TU69680 lncRNA downstream 102328 30599932 ~ 30602032 (+) True G55745
TU69754 lncRNA downstream 449762 30947366 ~ 30950209 (+) True G55800
TU69761 lncRNA downstream 657914 31155518 ~ 31163151 (+) True G55807
TU69914 lncRNA downstream 1045017 31542621 ~ 31547232 (+) True G55926
AMCG00009247 mRNA upstream 12162 30446676 ~ 30483381 (+) True AMCG00009247
AMCG00009245 mRNA upstream 74119 30407870 ~ 30421424 (+) True AMCG00009245
AMCG00009249 mRNA upstream 91303 30388953 ~ 30404240 (+) True AMCG00009249
AMCG00009248 mRNA upstream 121875 30363052 ~ 30373668 (+) True AMCG00009248
AMCG00009246 mRNA upstream 168015 30312794 ~ 30327528 (+) True AMCG00009246
AMCG00009251 mRNA downstream 19622 30517226 ~ 30530492 (+) True AMCG00009251
AMCG00009252 mRNA downstream 54952 30552556 ~ 30558292 (+) True AMCG00009252
AMCG00009257 mRNA downstream 119290 30616894 ~ 30642141 (+) True AMCG00009257
AMCG00009256 mRNA downstream 144602 30642206 ~ 30774490 (+) True AMCG00009256
AMCG00009264 mRNA downstream 341289 30838893 ~ 30846488 (+) True AMCG00009264
TU69474 other upstream 500105 29995126 ~ 29995438 (+) True G55591
TU69455 other upstream 583979 29907911 ~ 29911564 (+) True G55573
TU69299 other upstream 1320843 29173139 ~ 29174700 (+) True AMCG00009220
TU69266 other upstream 1388635 29103640 ~ 29106908 (+) True AMCG00009208
TU70069 other downstream 1664156 32161760 ~ 32165365 (+) True G56060
TU70453 other downstream 3503192 34000796 ~ 34031445 (+) True G56368
TU70456 other downstream 3518066 34015670 ~ 34018815 (+) True G56369
TU70668 other downstream 4891310 35388914 ~ 35389327 (+) True G56536
TU70945 other downstream 6862497 37360101 ~ 37367671 (+) True AMCG00009405

Expression Profile