RNA id: AMCG00010668


Basic Information

Item Value
RNA id AMCG00010668
length 1059
RNA type mRNA
GC content 0.60
exon number 8
gene id AMCG00010668
representative True

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38380527 ~ 38385701 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

atgtttgtatccATCTGCCGACGGGGTGACCGTGCGCACTTCCTGCCCGCCTGCATGCTCTCAGGGCCGGGAGACGTGCGGCTCTTCACTGGGATCTCCGGCGCCTCCAACCCGCATTTCTCCCGCAGCCGAGGCGCCGCAGGACGGTCTGACCGCCAGGACTGTCCCGCCGCAGAGGACCCTGACAGCGAGCAGCCtatcacacacaacacaccagAGGTCCCAATCCACGCCAGACTGTCCTGCCCTGGCACGTCACCTGTGAGCCATGAGGAAGTGCAGTGTGTGGACGTTCCTCCCCATCACGTTTGCGCTCTTCTCCTGCGCGGGACTGTGGATCGTACTCGCCATCTGCGCTGCTTCGGCTGTTTAATTAAGTTGCAGAGGTTCTCTGTGTACTTCATCGCTGTGGAGGATGAAAAAGTAACGCCCCTCACCTCGGAGTACAGCATCGCAGGGAACACCCCCCCTGCCAGCTGTGTGTTCAGCCAGGTCATGAACACGGCAGCGTTTGTAGCGTTTGCCATTGCAGTCCTGCGCTACATACAGCTGAAGCCCAGAGTGCAGAAGCCGTGGCTGAATATCGGCAGCCTGGTGTCTCTGTCCTTGTCCTGCGTTGGGATGACCCTAGTGGGGAACTTTCAGCTGTCGAACGATGAGGAGCTGCACAACGTGGGCACGTCCATGGCCTTCGGGCTGGGGACGCTGGCCTGCTGGATTCAGTCTGTGCTGACGCTGAAGGTCAACCTGCGCAACGAGGGCAGGAAGGCCGGGGTGCCGCGCTTCCTCCTGTCGGCCGCCATCACCCTGTGCATGCTGCTCTGTATCCTTTCGCTTCGTGAGCCGGTAAATTTCGCCCTGATGGCGCAGCGGATGCACATGGACGCGGCCCGGGCCCAGTGGGCGCTGGTGATGTTCCTGCTGACCTTCATCGGCTCCTTTGCCATCGAATTCAGACACTTCAGCTTCGAGATCGTCTGCACCGACAACCAGGATGCCGCCCTCAGCCTCTCCGAGACCTTTTCGGAGATATCGGAGCATCAGTCCGATCAGCTATAG

Function

GO: NA

KEGG:

id description
K21846 TMEM150; transmembrane protein 150

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU102612 lncRNA downstream 92992 38285755 ~ 38287535 (-) True G82252
TU102443 lncRNA downstream 882414 37497718 ~ 37498113 (-) True G82126
TU102442 lncRNA downstream 885814 37492723 ~ 37494713 (-) True G82125
TU102309 lncRNA downstream 1020705 37357333 ~ 37359822 (-) True G82020
TU102306 lncRNA downstream 1024324 37355758 ~ 37356203 (-) True G82017
TU102714 lncRNA upstream 37778 38423479 ~ 38424982 (-) False AMCG00010666
TU102715 lncRNA upstream 37778 38423479 ~ 38424982 (-) False AMCG00010666
TU102767 lncRNA upstream 132964 38518665 ~ 38526795 (-) True G82347
TU102788 lncRNA upstream 240825 38626526 ~ 38626937 (-) True G82362
TU102892 lncRNA upstream 418125 38803826 ~ 38828301 (-) True G82435
AMCG00010658 mRNA downstream 10503 38356423 ~ 38370024 (-) True AMCG00010658
AMCG00010659 mRNA downstream 33666 38344121 ~ 38346861 (-) True AMCG00010659
AMCG00010657 mRNA downstream 36973 38336036 ~ 38343554 (-) True AMCG00010657
AMCG00010649 mRNA downstream 103760 38253115 ~ 38276767 (-) True AMCG00010649
AMCG00010651 mRNA downstream 142820 38222463 ~ 38237707 (-) True AMCG00010651
AMCG00010663 mRNA upstream 831 38386532 ~ 38401883 (-) True AMCG00010663
AMCG00010665 mRNA upstream 17306 38403007 ~ 38421660 (-) True AMCG00010665
AMCG00010666 mRNA upstream 37784 38423485 ~ 38425067 (-) True AMCG00010666
AMCG00010662 mRNA upstream 40142 38425843 ~ 38443289 (-) True AMCG00010662
AMCG00010664 mRNA upstream 72074 38457775 ~ 38465061 (-) True AMCG00010664
TU102417 other downstream 972427 37405880 ~ 37408100 (-) True AMCG00010623
TU102168 other downstream 1696709 36677697 ~ 36683818 (-) True AMCG00010602
TU101930 other downstream 2663855 35714951 ~ 35716672 (-) True G81716
TU101338 other downstream 5380528 32995450 ~ 32999999 (-) False AMCG00010509
TU101107 other downstream 6408772 31954384 ~ 31971755 (-) True AMCG00010487
TU102742 other upstream 72073 38457774 ~ 38460711 (-) False AMCG00010664
TU102754 other upstream 91509 38477210 ~ 38483422 (-) False AMCG00010667
TU102793 other upstream 249389 38635090 ~ 38636502 (-) True AMCG00010679
TU102829 other upstream 269217 38654918 ~ 38688260 (-) True G82392
TU103099 other upstream 1119883 39505584 ~ 39509159 (-) False G82607

Expression Profile