Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011309 |
| length | 1311 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 11 |
| gene id | AMCG00011309 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 17417595 ~ 17426498 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0060027 | convergent extension involved in gastrulation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004707 | MAP kinase activity | molecular_function |
| id | description |
|---|---|
| K04440 | JNK; mitogen-activated protein kinase 8/9/10 (c-Jun N-terminal kinase) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU132235 | lncRNA | upstream | 38735 | 17378620 ~ 17378860 (+) | True | G105715 |
| TU132204 | lncRNA | upstream | 105527 | 17309759 ~ 17312068 (+) | True | G105684 |
| TU131997 | lncRNA | upstream | 692442 | 16724688 ~ 16725153 (+) | True | G105538 |
| TU131909 | lncRNA | upstream | 1217296 | 16200049 ~ 16200299 (+) | True | G105466 |
| TU131891 | lncRNA | upstream | 1284608 | 16132758 ~ 16132987 (+) | True | G105448 |
| TU132287 | lncRNA | downstream | 308492 | 17734990 ~ 17742387 (+) | True | G105756 |
| TU132310 | lncRNA | downstream | 324752 | 17751250 ~ 17751484 (+) | True | G105769 |
| TU132318 | lncRNA | downstream | 339393 | 17765891 ~ 17768221 (+) | True | G105776 |
| TU132337 | lncRNA | downstream | 573138 | 17999636 ~ 18000343 (+) | True | G105792 |
| TU132340 | lncRNA | downstream | 606257 | 18032755 ~ 18033025 (+) | True | G105794 |
| AMCG00011300 | mRNA | upstream | 109771 | 17295543 ~ 17307824 (+) | True | AMCG00011300 |
| AMCG00011302 | mRNA | upstream | 156378 | 17260015 ~ 17261217 (+) | True | AMCG00011302 |
| AMCG00011298 | mRNA | upstream | 195076 | 17219688 ~ 17222519 (+) | True | AMCG00011298 |
| AMCG00011296 | mRNA | upstream | 398289 | 17009308 ~ 17019306 (+) | True | AMCG00011296 |
| AMCG00011295 | mRNA | upstream | 409309 | 17006454 ~ 17008286 (+) | True | AMCG00011295 |
| AMCG00011307 | mRNA | downstream | 118267 | 17544765 ~ 17556370 (+) | True | AMCG00011307 |
| AMCG00011308 | mRNA | downstream | 137087 | 17563585 ~ 17568228 (+) | True | AMCG00011308 |
| AMCG00011312 | mRNA | downstream | 144627 | 17571125 ~ 17579716 (+) | True | AMCG00011312 |
| AMCG00011310 | mRNA | downstream | 319164 | 17745662 ~ 17750420 (+) | True | AMCG00011310 |
| AMCG00011306 | mRNA | downstream | 326276 | 17752774 ~ 17755758 (+) | True | AMCG00011306 |
| TU132132 | other | upstream | 435354 | 16978492 ~ 16982241 (+) | True | AMCG00011293 |
| TU131803 | other | upstream | 1433516 | 15963340 ~ 15984079 (+) | True | G105373 |
| TU131793 | other | upstream | 1561811 | 15853764 ~ 15855784 (+) | True | AMCG00011252 |
| TU131792 | other | upstream | 1565206 | 15850646 ~ 15852389 (+) | True | AMCG00011253 |
| TU131632 | other | upstream | 2095170 | 15320780 ~ 15322425 (+) | False | AMCG00011241 |
| TU132321 | other | downstream | 357665 | 17784163 ~ 17788050 (+) | True | G105778 |
| TU132460 | other | downstream | 1686412 | 19112910 ~ 19117369 (+) | True | AMCG00011328 |
| TU132491 | other | downstream | 1795557 | 19222055 ~ 19222421 (+) | True | G105916 |
| TU132810 | other | downstream | 2668731 | 20095229 ~ 20162966 (+) | False | G106139 |
| TU132789 | other | downstream | 2685582 | 20112080 ~ 20162966 (+) | True | G106139 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00009866 | False | 1287 | mRNA | 0.51 | 11 | NC_007123.7 | 2506126 ~ 2518178 (-) |
