RNA id: AMCG00019784



Basic Information


Item Value
RNA id AMCG00019784
length 195
RNA type mRNA
GC content 0.53
exon number 2
gene id AMCG00019784
representative True

Chromosome Information


Item Value
chromosome id CM030124.1
NCBI id CM030124.1
chromosome length 51038645
location 44266241 ~ 44269213 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGTATCGAGCGAGCCGTGCCTGGCTGAGGAAGACGACTGCTTCTCGAGTACTATGAAGGAGATGATTGGAGGCTGCTGCGTTTGCTCAGACGAGAGAGGTTGGGCTGAAAATCCTCTGGTCTACTGTGACGGGCATGGCTGTAATGTCGCTGTTCACCAAGAAAGTGTGAATCTCAGGAGAGAGCAGCTAGGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU46354 lncRNA upstream 214810 44046329 ~ 44051431 (+) True G37102
TU46318 lncRNA upstream 331922 43934103 ~ 43934319 (+) True G37070
TU46314 lncRNA upstream 351422 43914192 ~ 43914819 (+) False G37068
TU46406 lncRNA downstream 59806 44329019 ~ 44334697 (+) True G37135
TU46448 lncRNA downstream 135379 44404592 ~ 44406930 (+) True G37168
TU46453 lncRNA downstream 166886 44436099 ~ 44443701 (+) False AMCG00019785
TU46484 lncRNA downstream 245755 44514968 ~ 44517929 (+) True G37199
TU46527 lncRNA downstream 511904 44781117 ~ 44781942 (+) True G37231
AMCG00019775 mRNA upstream 195584 44060525 ~ 44070657 (+) True AMCG00019775
AMCG00019773 mRNA upstream 221566 44014510 ~ 44044675 (+) True AMCG00019773
AMCG00019770 mRNA upstream 301973 43949035 ~ 43964268 (+) True AMCG00019770
AMCG00019767 mRNA upstream 561156 43702543 ~ 43705085 (+) True AMCG00019767
AMCG00019766 mRNA upstream 700202 43565086 ~ 43566039 (+) True AMCG00019766
AMCG00019780 mRNA downstream 7638 44276851 ~ 44332148 (+) True AMCG00019780
AMCG00019781 mRNA downstream 63432 44332645 ~ 44339115 (+) True AMCG00019781
AMCG00019785 mRNA downstream 166709 44435922 ~ 44443756 (+) True AMCG00019785
AMCG00019786 mRNA downstream 175678 44444891 ~ 44453292 (+) True AMCG00019786
AMCG00019787 mRNA downstream 210249 44479462 ~ 44497485 (+) True AMCG00019787
TU46357 other upstream 209638 44053074 ~ 44056603 (+) True G37105
TU46181 other upstream 932928 43330292 ~ 43333313 (+) True G36954
TU46165 other upstream 995356 43261894 ~ 43270885 (+) False AMCG00019758
TU46131 other upstream 1303583 42960656 ~ 42962658 (+) True AMCG00019755
TU46002 other upstream 1707305 42556540 ~ 42558936 (+) True AMCG00019747
TU46693 other downstream 1010242 45279455 ~ 45339619 (+) False G37372
TU46904 other downstream 2521814 46791027 ~ 46791485 (+) True G37561
TU47161 other downstream 4181415 48450628 ~ 48451167 (+) True G37779
TU47362 other downstream 5289269 49558482 ~ 49561383 (+) True G37962
TU47365 other downstream 5293681 49562894 ~ 49563214 (+) True G37964

Expression Profile