Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU116575 |
| length | 404 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC122354525 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 2483670 ~ 2484928 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116534 | lncRNA | downstream | 559388 | 1923705 ~ 1924282 (-) | True | G78726 |
| XR_006252086.1 | lncRNA | downstream | 742652 | 1739700 ~ 1741018 (-) | True | LOC122354127 |
| TU116306 | lncRNA | downstream | 802510 | 1588704 ~ 1681160 (-) | False | LOC122354408 |
| TU116313 | lncRNA | downstream | 802510 | 1593234 ~ 1681160 (-) | False | LOC122354408 |
| TU116271 | lncRNA | downstream | 969767 | 1512836 ~ 1513903 (-) | True | G78574 |
| TU116576 | lncRNA | upstream | 2640 | 2487484 ~ 2487836 (-) | True | G78756 |
| TU116591 | lncRNA | upstream | 211565 | 2696409 ~ 2696697 (-) | True | G78769 |
| TU116593 | lncRNA | upstream | 212384 | 2697228 ~ 2697472 (-) | True | G78771 |
| TU116595 | lncRNA | upstream | 215669 | 2700513 ~ 2700729 (-) | True | G78773 |
| TU116596 | lncRNA | upstream | 310178 | 2795022 ~ 2795296 (-) | True | G78774 |
| XM_043252107.1 | mRNA | downstream | 307742 | 1966493 ~ 2175928 (-) | False | ptprga |
| XM_043252106.1 | mRNA | downstream | 307742 | 1966493 ~ 2175928 (-) | True | ptprga |
| XM_043252108.1 | mRNA | downstream | 307743 | 1966493 ~ 2175927 (-) | False | ptprga |
| XM_043252529.1 | mRNA | downstream | 520060 | 1953550 ~ 1963610 (-) | True | cse1l |
| XM_043251248.1 | mRNA | downstream | 530568 | 1949640 ~ 1953102 (-) | True | LOC122353511 |
| XM_043252685.1 | mRNA | upstream | 323140 | 2807984 ~ 2811364 (-) | True | LOC122354490 |
| XM_043252686.1 | mRNA | upstream | 328508 | 2813352 ~ 2816128 (-) | False | LOC122354491 |
| XM_043252687.1 | mRNA | upstream | 328508 | 2813352 ~ 2816128 (-) | True | LOC122354491 |
| XM_043252510.1 | mRNA | upstream | 334744 | 2819588 ~ 2830067 (-) | True | LOC122354336 |
| XM_043252511.1 | mRNA | upstream | 455296 | 2940140 ~ 2942199 (-) | True | LOC122354337 |
| XR_006252158.1 | other | downstream | 606255 | 1877275 ~ 1877415 (-) | True | LOC122354708 |
| XR_006252157.1 | other | downstream | 608881 | 1874649 ~ 1874789 (-) | True | LOC122354706 |
| XR_006252159.1 | other | downstream | 611365 | 1872166 ~ 1872305 (-) | True | LOC122354709 |
| XR_006252143.1 | other | downstream | 613986 | 1869547 ~ 1869684 (-) | True | LOC122354692 |
| XR_006252144.1 | other | downstream | 616261 | 1867270 ~ 1867409 (-) | True | LOC122354693 |
| unassigned_transcript_1621 | other | upstream | 216364 | 2701208 ~ 2701279 (-) | True | trnap-cgg_2 |
| unassigned_transcript_1622 | other | upstream | 216964 | 2701808 ~ 2701885 (-) | True | trnaf-gaa_2 |
| unassigned_transcript_1623 | other | upstream | 217952 | 2702796 ~ 2702867 (-) | True | trnap-ugg_6 |
| unassigned_transcript_1624 | other | upstream | 218551 | 2703395 ~ 2703472 (-) | True | trnaf-gaa_3 |
| unassigned_transcript_1625 | other | upstream | 218715 | 2703559 ~ 2703632 (-) | True | trnai-aau_3 |
