Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU116591 |
| length | 289 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G78769 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 2696409 ~ 2696697 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116576 | lncRNA | downstream | 208573 | 2487484 ~ 2487836 (-) | True | G78756 |
| XR_006252118.1 | lncRNA | downstream | 211481 | 2483695 ~ 2484928 (-) | True | LOC122354525 |
| TU116575 | lncRNA | downstream | 211565 | 2483670 ~ 2484844 (-) | False | LOC122354525 |
| TU116534 | lncRNA | downstream | 772127 | 1923705 ~ 1924282 (-) | True | G78726 |
| XR_006252086.1 | lncRNA | downstream | 955391 | 1739700 ~ 1741018 (-) | True | LOC122354127 |
| TU116593 | lncRNA | upstream | 531 | 2697228 ~ 2697472 (-) | True | G78771 |
| TU116595 | lncRNA | upstream | 3816 | 2700513 ~ 2700729 (-) | True | G78773 |
| TU116596 | lncRNA | upstream | 98325 | 2795022 ~ 2795296 (-) | True | G78774 |
| XR_006252103.1 | lncRNA | upstream | 102836 | 2799533 ~ 2800028 (-) | True | LOC122354391 |
| TU116670 | lncRNA | upstream | 243455 | 2940152 ~ 2942206 (-) | False | LOC122354337 |
| XM_043252107.1 | mRNA | downstream | 520481 | 1966493 ~ 2175928 (-) | False | ptprga |
| XM_043252106.1 | mRNA | downstream | 520481 | 1966493 ~ 2175928 (-) | True | ptprga |
| XM_043252108.1 | mRNA | downstream | 520482 | 1966493 ~ 2175927 (-) | False | ptprga |
| XM_043252529.1 | mRNA | downstream | 732799 | 1953550 ~ 1963610 (-) | True | cse1l |
| XM_043251246.1 | mRNA | downstream | 743312 | 1950040 ~ 1953097 (-) | False | LOC122353511 |
| XM_043252685.1 | mRNA | upstream | 111287 | 2807984 ~ 2811364 (-) | True | LOC122354490 |
| XM_043252686.1 | mRNA | upstream | 116655 | 2813352 ~ 2816128 (-) | False | LOC122354491 |
| XM_043252687.1 | mRNA | upstream | 116655 | 2813352 ~ 2816128 (-) | True | LOC122354491 |
| XM_043252510.1 | mRNA | upstream | 122891 | 2819588 ~ 2830067 (-) | True | LOC122354336 |
| XM_043252511.1 | mRNA | upstream | 243443 | 2940140 ~ 2942199 (-) | True | LOC122354337 |
| XR_006252158.1 | other | downstream | 818994 | 1877275 ~ 1877415 (-) | True | LOC122354708 |
| XR_006252157.1 | other | downstream | 821620 | 1874649 ~ 1874789 (-) | True | LOC122354706 |
| XR_006252159.1 | other | downstream | 824104 | 1872166 ~ 1872305 (-) | True | LOC122354709 |
| XR_006252143.1 | other | downstream | 826725 | 1869547 ~ 1869684 (-) | True | LOC122354692 |
| XR_006252144.1 | other | downstream | 829000 | 1867270 ~ 1867409 (-) | True | LOC122354693 |
| unassigned_transcript_1621 | other | upstream | 4511 | 2701208 ~ 2701279 (-) | True | trnap-cgg_2 |
| unassigned_transcript_1622 | other | upstream | 5111 | 2701808 ~ 2701885 (-) | True | trnaf-gaa_2 |
| unassigned_transcript_1623 | other | upstream | 6099 | 2702796 ~ 2702867 (-) | True | trnap-ugg_6 |
| unassigned_transcript_1624 | other | upstream | 6698 | 2703395 ~ 2703472 (-) | True | trnaf-gaa_3 |
| unassigned_transcript_1625 | other | upstream | 6862 | 2703559 ~ 2703632 (-) | True | trnai-aau_3 |
