Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006252086.1 |
| length | 903 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC122354127 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056709.1 |
| NCBI id | CM032078.1 |
| chromosome length | 24513629 |
| location | 1739700 ~ 1741018 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | description |
|---|---|
| ko05016 | Huntington disease |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU116306 | lncRNA | downstream | 58540 | 1588704 ~ 1681160 (-) | False | LOC122354408 |
| TU116313 | lncRNA | downstream | 58540 | 1593234 ~ 1681160 (-) | False | LOC122354408 |
| TU116271 | lncRNA | downstream | 225797 | 1512836 ~ 1513903 (-) | True | G78574 |
| TU116270 | lncRNA | downstream | 227468 | 1512005 ~ 1512232 (-) | True | G78573 |
| TU116269 | lncRNA | downstream | 228174 | 1510981 ~ 1511526 (-) | True | G78572 |
| TU116534 | lncRNA | upstream | 182687 | 1923705 ~ 1924282 (-) | True | G78726 |
| TU116575 | lncRNA | upstream | 742652 | 2483670 ~ 2484844 (-) | False | LOC122354525 |
| XR_006252118.1 | lncRNA | upstream | 742677 | 2483695 ~ 2484928 (-) | True | LOC122354525 |
| TU116576 | lncRNA | upstream | 746466 | 2487484 ~ 2487836 (-) | True | G78756 |
| TU116591 | lncRNA | upstream | 955391 | 2696409 ~ 2696697 (-) | True | G78769 |
| XM_043252160.1 | mRNA | downstream | 9861 | 1725270 ~ 1729839 (-) | False | inpp1 |
| XM_043252161.1 | mRNA | downstream | 9866 | 1725270 ~ 1729834 (-) | True | inpp1 |
| XM_043252411.1 | mRNA | downstream | 23571 | 1704624 ~ 1716129 (-) | False | nab2 |
| XM_043252410.1 | mRNA | downstream | 23573 | 1704624 ~ 1716127 (-) | False | nab2 |
| XM_043252414.1 | mRNA | downstream | 39242 | 1697584 ~ 1700458 (-) | True | cnpy2 |
| XM_043251374.1 | mRNA | upstream | 21557 | 1762575 ~ 1766074 (-) | True | LOC122353575 |
| XM_043252505.1 | mRNA | upstream | 37291 | 1778309 ~ 1786347 (-) | True | mmp19 |
| XM_043251571.1 | mRNA | upstream | 48734 | 1789752 ~ 1797665 (-) | True | pmela |
| XM_043252517.1 | mRNA | upstream | 61727 | 1802745 ~ 1822748 (-) | True | timeless |
| XM_043251544.1 | mRNA | upstream | 87389 | 1828407 ~ 1850291 (-) | False | gdf11 |
| XR_006252099.1 | other | downstream | 23571 | 1704624 ~ 1716129 (-) | True | nab2 |
| TU116011 | other | downstream | 517234 | 1217451 ~ 1222466 (-) | False | phactr3b |
| unassigned_transcript_1591 | other | downstream | 575359 | 1164270 ~ 1164341 (-) | True | trnac-gca_119 |
| unassigned_transcript_1590 | other | downstream | 576046 | 1163583 ~ 1163654 (-) | True | trnac-gca_118 |
| unassigned_transcript_1589 | other | downstream | 576266 | 1163363 ~ 1163434 (-) | True | trnac-gca_117 |
| XR_006252142.1 | other | upstream | 121669 | 1862687 ~ 1862826 (-) | True | LOC122354691 |
| XR_006252152.1 | other | upstream | 123989 | 1865007 ~ 1865147 (-) | True | LOC122354701 |
| XR_006252144.1 | other | upstream | 126252 | 1867270 ~ 1867409 (-) | True | LOC122354693 |
| XR_006252143.1 | other | upstream | 128529 | 1869547 ~ 1869684 (-) | True | LOC122354692 |
| XR_006252159.1 | other | upstream | 131148 | 1872166 ~ 1872305 (-) | True | LOC122354709 |
