RNA id: XM_043251569.1



Basic Information


Item Value
RNA id XM_043251569.1
length 968
RNA type mRNA
GC content 0.42
exon number 11
gene id LOC122353695
representative False

Chromosome Information


Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 8499207 ~ 8503366 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTACTTTAGTCTCTTTTCTCACAATTGCTGTGATGGAGTTGTTCATCTTCACAGTTTTTCAGCTCCTGATGGAGGTCCAGTCTTACAgATTTCCTAAAGTAAAAGTATCTCCAGGTGTCATAAGAGAGTCCAGCTCAGTGAAGATCAGCTGTGAGAAAGAACCAGGTCTTATAGTGAATAATTGTTATTTCTACATAAACAGAAAGGAGGAGAAAATGAAAACCCCTTCATCGTGTGAGCTGGATCTCACTGGTGCTGAAGTGCTCAGATGGGCAGCTGTGAAATCACCTGAATCAATAGACATTTACTGTTACTTCACAATAAATCAGTTCAGTGCAGACATATCATCATCTGAGTCTGATCCTATCACAGTGAGGGTACTAGtttcAACATCAACCACAACTAAACAAACTACTACAACAGCCATGAAAACCTCGGATCTCCAATCCAAGACAAACCCGCCAAACAGTACGACAAAGGAAGTTCATTCACTCGTTCCTAAAGgCGTATTATTTATAGTGCTGGCTTCCACTGCTGTTGCTGTCATTTTGTCTGGACTCATGGGACTTGGGATCTGTCTGTGCTGGTTTTCACgtaaaaaaagaagaaaactcaataaaatgagatcaataaaaccacatgcccCCATTCAAGAATCTGGTATAAGTTGTTCTGGGCCTGCAGAGACACATTCTCTGATCACATCTGTACCAGAAACATCTCAGCCCATATCTGGAGGCCTCAAACACCAGGACAGAACTGCAGACCCCACAAAAGACATTACTTCTGTGAATGTACTTTACCAGCCCTCAGGCCCACACATGCTTGTCGTGAACTACCTTAACAGTTCTGCATTGCATTACAGACGGTTTGATCAATAACCAACAGAAACAGGGAAATCCAGAAGAAAAGaaCGTTTATCACCTGTACAGCACGATCCCTGAAATCCAGTTCACTCAGATGCAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006252076.1 lncRNA downstream 48689 8445250 ~ 8450614 (-) True LOC122353969
TU118300 lncRNA downstream 273301 8218760 ~ 8226002 (-) True G79971
TU118301 lncRNA downstream 273301 8218760 ~ 8226002 (-) False G79971
TU118298 lncRNA downstream 280881 8218114 ~ 8218422 (-) True G79970
TU118297 lncRNA downstream 281253 8217743 ~ 8218050 (-) True G79969
TU118540 lncRNA upstream 5281 8508647 ~ 8535713 (-) True G80130
TU118559 lncRNA upstream 50050 8553416 ~ 8667800 (-) True LOC122353980
TU118584 lncRNA upstream 85723 8589089 ~ 8591007 (-) True G80144
TU118602 lncRNA upstream 163081 8666447 ~ 8676813 (-) True G80158
XR_006252082.1 lncRNA upstream 165890 8669256 ~ 8683250 (-) True LOC122353992
XM_043251567.1 mRNA downstream 2018 8491771 ~ 8497285 (-) True LOC122353694
XM_043251899.1 mRNA downstream 54407 8435583 ~ 8444896 (-) False parapinopsinb
XM_043251898.1 mRNA downstream 58693 8435583 ~ 8440610 (-) True parapinopsinb
XM_043252727.1 mRNA downstream 158518 8323592 ~ 8340785 (-) True tkta
XM_043251625.1 mRNA downstream 180415 8306278 ~ 8318888 (-) False bicd2
XM_043252811.1 mRNA upstream 5293 8508659 ~ 8520020 (-) False LOC122354572
XM_043252810.1 mRNA upstream 5293 8508659 ~ 8520020 (-) False LOC122354572
XM_043252812.1 mRNA upstream 29407 8532773 ~ 8538544 (-) True LOC122354573
XM_043252814.1 mRNA upstream 29414 8532780 ~ 8538544 (-) False LOC122354573
XM_043252813.1 mRNA upstream 29414 8532780 ~ 8538544 (-) False LOC122354573
TU118535 other downstream 2018 8496188 ~ 8497285 (-) False LOC122353694
TU118295 other downstream 302918 8195818 ~ 8196385 (-) True G79967
TU118263 other downstream 355683 8092400 ~ 8143620 (-) True G79947
TU118247 other downstream 463770 8028606 ~ 8035533 (-) False snrpe
XR_006252128.1 other upstream 5293 8508659 ~ 8520020 (-) False LOC122354572
XR_006252127.1 other upstream 5293 8508659 ~ 8520020 (-) False LOC122354572
XR_006252126.1 other upstream 5293 8508659 ~ 8520020 (-) True LOC122354572
XR_006252130.1 other upstream 30116 8533482 ~ 8538544 (-) False LOC122354573
XR_006252129.1 other upstream 30850 8534216 ~ 8538544 (-) False LOC122354573

Expression Profile