RNA id: XM_043252814.1


Basic Information

Item Value
RNA id XM_043252814.1
length 888
RNA type mRNA
GC content 0.42
exon number 8
gene id LOC122354573
representative False

Chromosome Information

Item Value
chromosome id NC_056709.1
NCBI id CM032078.1
chromosome length 24513629
location 8532773 ~ 8538544 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCAGCTAAAGTCTCATtctgtctcttttctctctgaaaTGGAGATGTTGTTCTTCACAGTGTTTATACTCCTTGTGGAGGTTCAGTCTTACAaGTCTCCTACTGTAAGAGTATCTCCAGATCTCATAAGAGAGTCCAGCTCAGTGAAGATCAGCTGTGAGACGCCAGGAAAAGTTCCAGTGGATATGTGTTATTACTACACaaacagagaagagaagaataTAAAAATCAGTTGGAGATGTGAGCTGGATCTCACTGGTGCTGAACTGATCAGATGGGCAGCTGTAACATCACATGGATTAATCAATATTTCCTGTTACTACACAGTGAATGatacatcatcatcattaccTCATTCTCCTCCTGCCACAGTAAAAGTTATAGaGTCTCCTACTGTAAGAGTATCTCCAGATCTCATAAGAGAGTCCAGCTCAGTGAAGATCAGCTGTGAGACGCCAAATGTTACAGTGAATCAGTGTTATTTCTACACaaacagagaagagaagaataTAAAAACCAGTTGGAGATGTGAGCTGGATCTCACTGGTGCTGAACTGATCAGATGGGCAGATGTAACATCACATGGATTAATCAACATTTACTGTTACTACATAAGACTGAGAAATGATACTTCATCATCACCTCATTCTCCTCATGCCACAGTGAAAGTTATGGTTTCACCATCAACCATCACTGAACAAACTACAACTACCATGATAACCTCCTCCTCCGCTCCGCCTGACTCAACCAGAAAGACTCAAACATCTGTTCCTCACACTGGTCACACTCACTCTGAAGACTCACGGCTTCATTTCTGTCTGCACTCATAGGATTCATCTCTCTGTGCCTCTTTACCAGTTCTGACGTCTCCTACCAGCTGGAAACAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006252076.1 lncRNA downstream 82166 8445250 ~ 8450614 (-) True LOC122353969
TU118300 lncRNA downstream 306778 8218760 ~ 8226002 (-) True G79971
TU118301 lncRNA downstream 306778 8218760 ~ 8226002 (-) False G79971
TU118298 lncRNA downstream 314358 8218114 ~ 8218422 (-) True G79970
TU118297 lncRNA downstream 314730 8217743 ~ 8218050 (-) True G79969
TU118559 lncRNA upstream 14872 8553416 ~ 8667800 (-) True LOC122353980
TU118584 lncRNA upstream 50545 8589089 ~ 8591007 (-) True G80144
TU118602 lncRNA upstream 127903 8666447 ~ 8676813 (-) True G80158
XR_006252082.1 lncRNA upstream 130712 8669256 ~ 8683250 (-) True LOC122353992
XR_006252081.1 lncRNA upstream 131589 8670133 ~ 8675735 (-) True LOC122353991
XM_043252811.1 mRNA downstream 12760 8508659 ~ 8520020 (-) False LOC122354572
XM_043252810.1 mRNA downstream 12760 8508659 ~ 8520020 (-) False LOC122354572
XM_043251568.1 mRNA downstream 29414 8499207 ~ 8503366 (-) True LOC122353695
XM_043251569.1 mRNA downstream 29414 8499303 ~ 8503366 (-) False LOC122353695
XM_043251567.1 mRNA downstream 35495 8491771 ~ 8497285 (-) True LOC122353694
XM_043251927.1 mRNA upstream 5908 8544452 ~ 8550560 (-) True LOC122353982
XM_043251926.1 mRNA upstream 5908 8544452 ~ 8550556 (-) False LOC122353982
XM_043251925.1 mRNA upstream 15795 8554339 ~ 8569366 (-) False LOC122353980
XM_043251930.1 mRNA upstream 40693 8579237 ~ 8588988 (-) True LOC122353983
XM_043251928.1 mRNA upstream 40693 8579237 ~ 8583575 (-) False LOC122353983
XR_006252128.1 other downstream 12760 8508659 ~ 8520020 (-) False LOC122354572
XR_006252127.1 other downstream 12760 8508659 ~ 8520020 (-) False LOC122354572
XR_006252126.1 other downstream 12760 8508659 ~ 8520020 (-) True LOC122354572
TU118535 other downstream 35495 8496188 ~ 8497285 (-) False LOC122353694
TU118295 other downstream 336395 8195818 ~ 8196385 (-) True G79967
TU118561 other upstream 14872 8553416 ~ 8666340 (-) False LOC122353980
TU118567 other upstream 14872 8553416 ~ 8666340 (-) False LOC122353980
TU118562 other upstream 23040 8561584 ~ 8667800 (-) False LOC122353980
XR_006252079.1 other upstream 157906 8696450 ~ 8700757 (-) False LOC122353984
XR_006252078.1 other upstream 158620 8697164 ~ 8700757 (-) False LOC122353984

Expression Profile