RNA id: XM_043224595.1


Basic Information

Item Value
RNA id XM_043224595.1
length 1896
RNA type mRNA
GC content 0.51
exon number 11
gene id stk25b
representative True

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 10055965 ~ 10061716 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCCTATTATTTTGTTCTCTCGCAAGCAATAAATGAAGAGCCGCCCGAACGCGAGCGGATCAACATAAAACAATTAGACACGGAAAGCGGCCAGCTCGTACGCAGATGCTTTCATACATGGAGTCACACGACACCTAACCGTGATTCTCGCCAGGCTGCGGGGTCCGCCATCAGGGGATTGGAGGCCGAAAACACGGCAGACGAACAGGACATGCAGAggtgtttttgtatgtaaaagCTAGCTAGCTAAGCAGGGGATCGGAGGAGGAAGAGCAAACCGTTGAAGAGtttttccagcacccctccttTGGCAGAAAGGGCCACATCTGCTCTCGTCGACAGCGACCTGCCTTCAGGATGGCGCACCTCCGCGACATGCAGAACCAGAATTCCCGGCTAGATCCGGAGGAGTATTTCACAAAACAGGAGCGCATTGGGAAGGGGTCTTTTGGTGAGGTCTACAAGGGTATCAACAATCGCACTAAAGAGGTGGTGGCCATCAAGATCATTGACCTGGAGGAGGCGGAAGATGAGATCGAGGACATTCAGCAGGAGATCACGGTGCTCAGCCAGTGTGACAGCCCCTATGTCACCAAATACTATGGCTCATATCTGAAGGGAACAAAGCTGTGGATCATCATGGAGTATTTAGGCGGCGGCTCTGCTTTAGATCTTTTGAAACCAGGACCGCTGGAGGAGACGTACATTGCCACTATATTGAGGGAGATTCTGAAGGGACTGGAATACTTGCATTCGGAGAGGAAGATTCACCGCGATATCAAAGCTGCCAACGTGCTGCTGTCTGAGCAGGGAGATGTGAAGCTGGCAGACTTCGGGGTGGCGGGACAGCTCACAGACACCCAGATCAAGAGAAACACTTTTGTGGGAACTCCTTTCTGGATGGCTCCGGAGGTCATCAAACAGTCCGCGTACGATTTTAAGGCAGACATTTGGTCCTTGGGAATTACAGCTATTGAACTGGCGAAGGGGGAACCCCCGAATTCTGACCTGCATCCGATGAGAGTGCTGTTTCTCATTCCCAAGAACACTCCCCCGACGCTGGAGGGCTCCTACAGCAAACCCTTCAAAGAGTTTGTGGAGGCATGCCTCAATAAAGACCCTCGCTTCCGGCCCACCGCCAAGGAGTTACTGAAGCACAAATTCATCACACGCTACACCAAGAAAACCTCCTATCTGACAGAGCTGATTGACCGATACCGCCGCTGGAAGTCTGAAGGCCACGGAGATGAATCCAGCTCTGATGATTCTGATATGGATGGAGATGGTGATGACAGAGACCAGTGTCCCGTGTGGACGTTCCCCACAGTCCGGCCCAGCTCCATGAACAAGCTCCAGAAGGgctacacaaacacagactcagAGGCAGCAGAGACGGTAAAGAGGCAGCCCAAGTCACAATGTCTGTCAGCGCTGGTCTCTCCCATCTTCAGAGAGCtgaaggagaagaggagggcATGTGGAGGAGGAATGGGTGCCATAGAGGAGCTGGAGAATGCCTTTAACCTGGCAGAAGAGTCCTGCCCTGGCATCTCTGACCTGCTGGTCACACACATGATGGAGAGAGTGTGCAgGTTTGCTCTGAATGGCAACACCACGCCATCATCACGGTGAAGCCCCgcctctgctgctgctgctcgcCCGGCCCccaaaatcatcatcatcaccatcttcatcttcatcgcCCAGTCAGGACCACAATACGACTGCCCATCGTTCACCCCGTCTTACCCCCAGAGATCTTTTAATTAgttatgattaaatatttttacagttttctttatagAATGGAAAGTATTTAAGAGAAAAAGCCATGTCATTGAGCGAACTGTGTTTACCTGTTAGATCCAAATCctattataaagtgtttatgGAAA

Function

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0007507 heart development biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:0006950 response to stress biological_process
GO:0006468 protein phosphorylation biological_process
GO:0045595 regulation of cell differentiation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function

KEGG:

id description
K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU15980 lncRNA upstream 40143 10014559 ~ 10015822 (+) True G10753
TU15979 lncRNA upstream 41599 10011937 ~ 10014366 (+) True G10752
TU15953 lncRNA upstream 45219 9989143 ~ 10010746 (+) True G10738
TU15974 lncRNA upstream 62570 9992784 ~ 9993395 (+) True G10749
TU15857 lncRNA upstream 229745 9825615 ~ 9826220 (+) True G10674
TU16087 lncRNA downstream 79626 10141342 ~ 10141971 (+) True G10838
TU16057 lncRNA downstream 96837 10158553 ~ 10161809 (+) True selenof
TU16166 lncRNA downstream 147847 10209563 ~ 10209851 (+) True G10883
TU16203 lncRNA downstream 329953 10391669 ~ 10391956 (+) True G10902
TU16204 lncRNA downstream 330977 10392693 ~ 10393150 (+) True G10903
XM_043253597.1 mRNA upstream 6859 10046848 ~ 10049106 (+) True thap4
XM_043253606.1 mRNA upstream 6859 10046848 ~ 10049106 (+) False thap4
XM_043219759.1 mRNA upstream 15112 10036539 ~ 10040853 (+) True agxtb
XM_043224123.1 mRNA upstream 94490 9942861 ~ 9961475 (+) True myo7bb
XM_043221924.1 mRNA upstream 115218 9928426 ~ 9940747 (+) True sap130b
XM_043219487.1 mRNA downstream 13441 10075157 ~ 10077334 (+) True LOC122324805
XM_043224583.1 mRNA downstream 16684 10078400 ~ 10079945 (+) True cldn18
XM_043258511.1 mRNA downstream 34693 10096409 ~ 10107424 (+) False znf644a
XM_043258504.1 mRNA downstream 34705 10096421 ~ 10107424 (+) True znf644a
XM_043263585.1 mRNA downstream 52857 10114573 ~ 10119939 (+) True gtf2b
XR_006247735.1 other upstream 139104 9911628 ~ 9916861 (+) True znf414
XR_006247736.1 other upstream 140474 9911628 ~ 9915491 (+) False znf414
TU15832 other upstream 304753 9746594 ~ 9751212 (+) True arpc5a
XR_006252402.1 other upstream 884050 9162611 ~ 9171915 (+) False olfm3b
TU15202 other upstream 1948188 8106865 ~ 8107777 (+) True G10212
TU16308 other downstream 649414 10711130 ~ 10718194 (+) True G10979
TU16555 other downstream 1178410 11240126 ~ 11256764 (+) False kcnh2a
TU16565 other downstream 1278147 11339863 ~ 11341111 (+) False mrpl34
TU16613 other downstream 1434644 11496360 ~ 11500078 (+) False mast3a
TU16615 other downstream 1434644 11496360 ~ 11498937 (+) False mast3a

Expression Profile