RNA id: TU94690



Basic Information


Item Value
RNA id TU94690
length 318
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G63980
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14265726 ~ 14266043 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCACTGTTCAAAAGATAAGGTTCTTGATTAAAGAAACTTTAACATCTGTGATTCCCTTTCAGTGCACAAGATTATAATAACCTTCATTGAGAAAGAAATAGTTCCTTGCATcactacaaaaaaagttattacaaGCGATTTTCATCTGCAACACTACGTAAcatctaaaatcattttaaaagactACTACTTCATTCATGAGAGCTTCTAGGATTGATATTGTTAAAAGCATTAGTAAGGTGATCTCACTTGTTCCAGGTCAGACGTTTCAAGCAGCCTGCAGGGTATTTGACTGGGCAGAATCCCCACGTTGTTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94689 lncRNA downstream 91 14265172 ~ 14265635 (-) True G63979
TU94683 lncRNA downstream 61805 14203642 ~ 14203921 (-) True G63976
TU94682 lncRNA downstream 62456 14203046 ~ 14203270 (-) True G63975
TU94662 lncRNA downstream 128303 14131391 ~ 14137423 (-) True G63955
TU94663 lncRNA downstream 137304 14128189 ~ 14128422 (-) True G63956
TU94694 lncRNA upstream 2561 14268604 ~ 14269763 (-) True G63981
TU94714 lncRNA upstream 32248 14298291 ~ 14298590 (-) True G63997
TU94902 lncRNA upstream 119561 14385604 ~ 14422900 (-) False LOC122350784
TU95018 lncRNA upstream 502930 14768973 ~ 14769271 (-) True G64223
TU95022 lncRNA upstream 512855 14778898 ~ 14779364 (-) True G64227
XM_043247241.1 mRNA downstream 6682 14225356 ~ 14259044 (-) False slc20a2
XM_043247238.1 mRNA downstream 6682 14225356 ~ 14259044 (-) False slc20a2
XM_043247237.1 mRNA downstream 6683 14225356 ~ 14259043 (-) False slc20a2
XM_043247240.1 mRNA downstream 18351 14225356 ~ 14247375 (-) True slc20a2
XM_043247239.1 mRNA downstream 20958 14225356 ~ 14244768 (-) False slc20a2
XM_043247806.1 mRNA upstream 7493 14273536 ~ 14285846 (-) True ercc6l2
XM_043247496.1 mRNA upstream 119557 14385600 ~ 14455243 (-) True LOC122350784
XM_043246722.1 mRNA upstream 189384 14455427 ~ 14493418 (-) True dock8
XM_043246723.1 mRNA upstream 189384 14455427 ~ 14485235 (-) False dock8
XM_043246687.1 mRNA upstream 354613 14620656 ~ 14625056 (-) True gucd1
TU94636 other downstream 402476 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1902631 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 2001193 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2468524 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2486475 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 458165 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 513488 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1017818 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1383183 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1390876 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile