RNA id: TU94683



Basic Information


Item Value
RNA id TU94683
length 280
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G63976
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14203642 ~ 14203921 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


agcatttatttaaataaggaaAATTTAGGATaggacaagacaaaacaaaataaaacagagtaGGATGACGAGCCACTCGCAACTGAAGGAGCTGTTTAAATCTGCCGGCAGAAGCTCAAACCCAGGCGTAACACTTCAGCTAATCATTATGTCACatcctgcaaaacaaaatacatacagaCAACCAGCCAAAAGTATGAACCATACTGGGttcataacaatataaatatatatatatatatatatatatatatatacacacatatatacatacataaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94682 lncRNA downstream 372 14203046 ~ 14203270 (-) True G63975
TU94662 lncRNA downstream 66219 14131391 ~ 14137423 (-) True G63955
TU94663 lncRNA downstream 75220 14128189 ~ 14128422 (-) True G63956
TU94670 lncRNA downstream 85640 14117730 ~ 14118002 (-) True G63963
TU94669 lncRNA downstream 103491 14099665 ~ 14100151 (-) True G63962
TU94689 lncRNA upstream 61251 14265172 ~ 14265635 (-) True G63979
TU94690 lncRNA upstream 61805 14265726 ~ 14266043 (-) True G63980
TU94694 lncRNA upstream 64683 14268604 ~ 14269763 (-) True G63981
TU94714 lncRNA upstream 94370 14298291 ~ 14298590 (-) True G63997
TU94902 lncRNA upstream 181683 14385604 ~ 14422900 (-) False LOC122350784
XM_043246031.1 mRNA downstream 9141 14193833 ~ 14194501 (-) True LOC122349900
XM_043246690.1 mRNA downstream 13398 14187429 ~ 14190244 (-) True mpeg1.1
XM_043246693.1 mRNA downstream 17501 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA downstream 17503 14181532 ~ 14186139 (-) False LOC122350320
XM_043246691.1 mRNA downstream 27819 14173054 ~ 14175823 (-) True LOC122350319
XM_043247241.1 mRNA upstream 21435 14225356 ~ 14259044 (-) False slc20a2
XM_043247238.1 mRNA upstream 21435 14225356 ~ 14259044 (-) False slc20a2
XM_043247237.1 mRNA upstream 21435 14225356 ~ 14259043 (-) False slc20a2
XM_043247240.1 mRNA upstream 21435 14225356 ~ 14247375 (-) True slc20a2
XM_043247239.1 mRNA upstream 21435 14225356 ~ 14244768 (-) False slc20a2
TU94636 other downstream 340392 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1840547 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1939109 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2406440 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2424391 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 520287 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 575610 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1079940 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1445305 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1452998 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile