RNA id: TU94669



Basic Information


Item Value
RNA id TU94669
length 487
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G63962
representative True

Chromosome Information


Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14099665 ~ 14100151 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAATAAGACATTAACCCGCACCTAATTAGTATGGGAATTCGGTGGGGGAATTTTCAGAGTTAAATCACTCATAACTCAAGCACCATTAAGCCACATTAGCGCATTTTTGCTTTGATATCTCTATTCAGAGAACATTAGCGCAATCTTCACAAACCGTTGCTTAGCTAAGCAGCGTAATTAGATAAATGGTGGCGGTAGTCATAGCGCCCGGAGGACCCTACCTTCCGGATGCCTTCTTTCGATTCCTCAACGTTGTTTTCGGCTCCTCCTGTCCGGTTGATCATCCTCCACATCTGCGAGTACATGGGGTCCCTCTCAAAAGGGTTCATGCCTTTGCTGCGGACCTGGTCGTAGACGGCCGAGTCCAGAACCGTGCCATATGGCAAGTCTGTCTGCTTAGCCAAATCCTGCAGAGACCTGGAGGGCAACATTGAAACATATTACAATCGGAAGAATTTGAGAAACAATAGCATTGGGTTGATGCCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94647 lncRNA downstream 36925 14062497 ~ 14062740 (-) True G63944
TU94645 lncRNA downstream 92647 14006813 ~ 14007018 (-) True G63942
TU94644 lncRNA downstream 101699 13997682 ~ 13997966 (-) True G63941
TU94566 lncRNA downstream 374191 13725069 ~ 13725474 (-) True G63874
TU94565 lncRNA downstream 375665 13723731 ~ 13724000 (-) True G63873
TU94670 lncRNA upstream 17579 14117730 ~ 14118002 (-) True G63963
TU94663 lncRNA upstream 28038 14128189 ~ 14128422 (-) True G63956
TU94662 lncRNA upstream 31240 14131391 ~ 14137423 (-) True G63955
TU94682 lncRNA upstream 102895 14203046 ~ 14203270 (-) True G63975
TU94683 lncRNA upstream 103491 14203642 ~ 14203921 (-) True G63976
XM_043246301.1 mRNA downstream 379151 13716628 ~ 13720514 (-) True mc3r
XM_043247173.1 mRNA downstream 458183 13639945 ~ 13641482 (-) True cebpb
XM_043247714.1 mRNA downstream 484327 13608854 ~ 13615338 (-) True adipor1b
XM_043247715.1 mRNA downstream 484333 13608854 ~ 13615332 (-) False adipor1b
XM_043247848.1 mRNA downstream 491388 13599250 ~ 13608277 (-) True LOC122351021
XM_043246691.1 mRNA upstream 72903 14173054 ~ 14175823 (-) True LOC122350319
XM_043246693.1 mRNA upstream 81381 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA upstream 81381 14181532 ~ 14186139 (-) False LOC122350320
XM_043246690.1 mRNA upstream 87278 14187429 ~ 14190244 (-) True mpeg1.1
XM_043246031.1 mRNA upstream 93682 14193833 ~ 14194501 (-) True LOC122349900
TU94636 other downstream 236415 13809428 ~ 13863250 (-) True G63933
XR_006251575.1 other downstream 1736570 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1835132 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 2302463 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 2320414 11778271 ~ 11779251 (-) True G63274
XR_006251614.1 other upstream 624057 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 679380 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1183710 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 1549075 15649226 ~ 15700896 (-) False mvb12bb
XR_006251608.1 other upstream 1556768 15656919 ~ 15700896 (-) False mvb12bb

Expression Profile