RNA id: AMCG00021130



Basic Information


Item Value
RNA id AMCG00021130
length 459
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00021130
representative True

Chromosome Information


Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 5966488 ~ 5970373 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTACCGCTCTCCTCATTTATTCATTGATGTACAGAGGCTACACAAGCAGGTGAAAGCCATTGAAGTCAACCTGCAGAAGGCTCTGGCCGAGGCCTCGGAGACCTGCACTCAGGAGTGTCTCATCCTCGGTCACTCCGATAGCTGTTGGATGCCCCCAGCATTGACCCAGTTCCAGCAGTCAACGAACCCCACGCTGCCCACCTTTGGATTTCAGCAAGGTTGGGCCCGTGGAACCAAGCCAGATGGCCGCCATACTCTGAGCAGGTCTGTCCCCAAAGAGGAGATTGACAAGGGCCAAGGGAGCAACCGGCCGCAGTTCTACAACACCCTGGAGAGACATTGTAGCAAAAAGGAGGATCCCGTCAAGGTCATCCCATTGGCTAACTTCACCCCATCCAATCAGCCGGCTCCTGCTACTGGGGGGACCACTGCCTTTGTCCACGAGCATCAGCTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU104492 lncRNA upstream 1148159 4818097 ~ 4818329 (+) True G83752
TU104481 lncRNA upstream 1235544 4634736 ~ 4730944 (+) True G83741
TU104445 lncRNA upstream 1674124 4292126 ~ 4292364 (+) True G83716
TU104432 lncRNA upstream 1679888 4280108 ~ 4286600 (+) True G83710
TU104425 lncRNA upstream 1700506 4262001 ~ 4265982 (+) False G83704
TU104599 lncRNA downstream 574158 6544531 ~ 6546601 (+) True AMCG00021133
TU104675 lncRNA downstream 672809 6643182 ~ 6643523 (+) True G83900
TU104679 lncRNA downstream 690356 6660729 ~ 6662819 (+) True G83904
TU104690 lncRNA downstream 708830 6679203 ~ 6681917 (+) True G83914
TU104762 lncRNA downstream 1080824 7051197 ~ 7056132 (+) True G83976
AMCG00021129 mRNA upstream 83654 5881916 ~ 5882834 (+) True AMCG00021129
AMCG00021128 mRNA upstream 178905 5769167 ~ 5787583 (+) True AMCG00021128
AMCG00021127 mRNA upstream 1071925 4891249 ~ 4894563 (+) True AMCG00021127
AMCG00021126 mRNA upstream 1118316 4844751 ~ 4848172 (+) True AMCG00021126
AMCG00021123 mRNA upstream 1205842 4752179 ~ 4760646 (+) True AMCG00021123
AMCG00021132 mRNA downstream 560607 6530980 ~ 6533315 (+) True AMCG00021132
AMCG00021133 mRNA downstream 573861 6544234 ~ 6546232 (+) False AMCG00021133
AMCG00021131 mRNA downstream 578738 6549111 ~ 6572385 (+) True AMCG00021131
AMCG00021139 mRNA downstream 602803 6573176 ~ 6583201 (+) True AMCG00021139
AMCG00021138 mRNA downstream 615767 6586140 ~ 6615644 (+) True AMCG00021138
TU104395 other upstream 1732732 4230972 ~ 4233756 (+) False AMCG00021114
TU104390 other upstream 1837272 4127271 ~ 4129216 (+) False AMCG00021113
TU104336 other upstream 2167705 3797841 ~ 3798783 (+) True G83624
TU103781 other upstream 5040013 918006 ~ 926475 (+) True AMCG00021049
TU104813 other downstream 1145008 7115381 ~ 7121237 (+) False AMCG00021150
TU104814 other downstream 1145008 7115381 ~ 7121237 (+) False AMCG00021150
TU105166 other downstream 2661354 8631727 ~ 8633410 (+) True G84301
TU105325 other downstream 3445894 9416267 ~ 9423419 (+) True G84425
TU105614 other downstream 4992775 10963148 ~ 10987174 (+) True G84657

Expression Profile