Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00021453 |
| length | 1485 |
| RNA type | mRNA |
| GC content | 0.61 |
| exon number | 3 |
| gene id | AMCG00021453 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030130.1 |
| NCBI id | CM030130.1 |
| chromosome length | 39556810 |
| location | 18109078 ~ 18112221 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0036065 | fucosylation | biological_process |
| GO:0006486 | protein glycosylation | biological_process |
| GO:0032580 | Golgi cisterna membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0046920 | alpha-(1->3)-fucosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K11257 | FUT11; galactoside 3-L-fucosyltransferase 11 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107381 | lncRNA | upstream | 460547 | 17648274 ~ 17648531 (+) | True | G86034 |
| TU107364 | lncRNA | upstream | 492625 | 17614614 ~ 17616453 (+) | True | G86020 |
| TU107359 | lncRNA | upstream | 523606 | 17581307 ~ 17585472 (+) | False | G86018 |
| TU107362 | lncRNA | upstream | 524365 | 17581307 ~ 17584713 (+) | True | G86018 |
| TU107347 | lncRNA | upstream | 576258 | 17532619 ~ 17532820 (+) | True | G86007 |
| TU107502 | lncRNA | downstream | 110614 | 18222835 ~ 18226242 (+) | True | G86117 |
| TU107503 | lncRNA | downstream | 117244 | 18229465 ~ 18229666 (+) | True | G86118 |
| TU107605 | lncRNA | downstream | 437207 | 18549428 ~ 18549759 (+) | True | G86202 |
| TU107625 | lncRNA | downstream | 502949 | 18615170 ~ 18618556 (+) | True | G86217 |
| TU107639 | lncRNA | downstream | 550972 | 18663193 ~ 18664533 (+) | True | G86227 |
| AMCG00021450 | mRNA | upstream | 41304 | 18061621 ~ 18067774 (+) | True | AMCG00021450 |
| AMCG00021451 | mRNA | upstream | 58674 | 18033191 ~ 18050404 (+) | True | AMCG00021451 |
| AMCG00021440 | mRNA | upstream | 601948 | 17494793 ~ 17507130 (+) | True | AMCG00021440 |
| AMCG00021439 | mRNA | upstream | 616419 | 17483091 ~ 17492659 (+) | True | AMCG00021439 |
| AMCG00021441 | mRNA | upstream | 637344 | 17470366 ~ 17471734 (+) | False | AMCG00021441 |
| AMCG00021454 | mRNA | downstream | 55626 | 18167847 ~ 18170544 (+) | True | AMCG00021454 |
| AMCG00021455 | mRNA | downstream | 64959 | 18177180 ~ 18188162 (+) | True | AMCG00021455 |
| AMCG00021463 | mRNA | downstream | 225835 | 18338056 ~ 18387523 (+) | True | AMCG00021463 |
| AMCG00021465 | mRNA | downstream | 376682 | 18488903 ~ 18540148 (+) | True | AMCG00021465 |
| AMCG00021466 | mRNA | downstream | 443571 | 18555792 ~ 18556400 (+) | True | AMCG00021466 |
| TU107177 | other | upstream | 1104947 | 16997877 ~ 17004131 (+) | True | G85869 |
| TU107080 | other | upstream | 1395040 | 16656644 ~ 16714038 (+) | False | G85787 |
| TU107079 | other | upstream | 1447196 | 16656644 ~ 16661882 (+) | True | G85787 |
| TU107049 | other | upstream | 1516105 | 16590181 ~ 16592973 (+) | True | G85764 |
| TU106850 | other | upstream | 2035460 | 16063600 ~ 16073618 (+) | False | AMCG00021373 |
| TU107506 | other | downstream | 136269 | 18248490 ~ 18249686 (+) | True | G86121 |
| TU107757 | other | downstream | 1167544 | 19279765 ~ 19282915 (+) | False | AMCG00021485 |
| TU107857 | other | downstream | 1387579 | 19499800 ~ 19501242 (+) | True | G86407 |
| TU108101 | other | downstream | 2230389 | 20342610 ~ 20401249 (+) | False | G86601 |
| TU108117 | other | downstream | 2266202 | 20378423 ~ 20380424 (+) | True | G86616 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00014195 | True | 2262 | mRNA | 0.44 | 4 | NC_007125.7 | 14608099 ~ 14622984 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000110_03802977_03807616.mRNA | True | 2223 | mRNA | 0.48 | 3 | CI01000110 | 3802191 ~ 3807616 (-) |
