Fish Single-cell RNA Database

CELL TYPE: SHFP

Distribution of SHFP in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000016691	cd9b	4: 4234994 ~ 4261673 (-)
ENSDARG00000011769	cpm	4: 23740655 ~ 23759213 (-)
ENSDARG00000087196	fibinb	7: 34290051 ~ 34293073 (+)
ENSDARG00000099518	si:ch211-119e14.1	7: 18606798 ~ 18617187 (-)
ENSDARG00000035873	fjx1	7: 49797528 ~ 49801183 (-)
ENSDARG00000102750	cdh1	7: 53059299 ~ 53117237 (-)
ENSDARG00000006754	mllt3	7: 18779555 ~ 18881358 (-)
ENSDARG00000102178	emilin2b	7: 71664624 ~ 71687849 (+)
ENSDARG00000088332	alx4a	7: 26893688 ~ 26924903 (-)
ENSDARG00000070100	si:ch211-168d1.3	7: 7279903 ~ 7373059 (+)
ENSDARG00000105568	si:ch211-194p6.10	7: 33151731 ~ 33155212 (+)
ENSDARG00000035904	crabp1b	7: 48319916 ~ 48342750 (+)
ENSDARG00000036096	smad3a	7: 34102661 ~ 34149263 (-)
ENSDARG00000033466	tagln2	5: 37087583 ~ 37095460 (+)
ENSDARG00000074033	adamtsl2	5: 65880890 ~ 65921536 (-)
ENSDARG00000078270	CU467961.1	5: 54945021 ~ 55114917 (-)
ENSDARG00000017320	f11r.1	5: 29831195 ~ 29848772 (+)
ENSDARG00000068036	tmem119b	5: 31872049 ~ 31875645 (-)
ENSDARG00000018025	tbx2a	5: 56504717 ~ 56513825 (-)
ENSDARG00000100475	fgf10b	5: 8769069 ~ 8817841 (-)
ENSDARG00000078272	NA	5: 11502578 ~ 11573490 (-)
ENSDARG00000099411	zgc:158343	5: 9823754 ~ 9824908 (-)
ENSDARG00000011579	hoxb10a	3: 23669267 ~ 23671863 (+)
ENSDARG00000056023	hoxb9a	3: 23677351 ~ 23682436 (+)
ENSDARG00000056030	hoxb7a	3: 23691847 ~ 23696208 (+)
ENSDARG00000096849	si:dkey-16p21.8	3: 32325143 ~ 32337695 (-)
ENSDARG00000054616	cldni	3: 30921246 ~ 30927002 (+)
ENSDARG00000087193	prrg2	3: 32416948 ~ 32424303 (+)
ENSDARG00000037879	lfng	3: 41917499 ~ 41926869 (+)
ENSDARG00000022254	prkcbb	3: 35005062 ~ 35266060 (+)
ENSDARG00000037921	gng13b	3: 35589212 ~ 35602233 (-)
ENSDARG00000098465	si:ch73-366l1.5	3: 60525982 ~ 60571218 (-)
ENSDARG00000017624	krt4	6: 39308498 ~ 39313027 (-)
ENSDARG00000015947	matn4	6: 52790049 ~ 52846194 (+)
ENSDARG00000063295	myh9a	6: 7735806 ~ 7776612 (-)
ENSDARG00000044356	tp63	6: 28795780 ~ 28914225 (+)
ENSDARG00000078781	si:ch211-161c3.6	6: 53373498 ~ 53391727 (-)
ENSDARG00000078725	nos1apa	6: 35099897 ~ 35106425 (-)
ENSDARG00000040606	tfap2c	6: 56141852 ~ 56179707 (+)
ENSDARG00000088717	ecrg4b	6: 15268685 ~ 15300140 (+)
ENSDARG00000020929	fam49ba	2: 32215272 ~ 32262287 (-)
ENSDARG00000038694	zgc:101744	2: 37089362 ~ 37103622 (-)
ENSDARG00000074262	nck1a	2: 24963861 ~ 24981356 (-)
ENSDARG00000068323	astn1	2: 34572690 ~ 34984255 (+)
ENSDARG00000099478	hs2st1a	2: 22363824 ~ 22398790 (+)
ENSDARG00000060397	hhip	1: 35790082 ~ 35835863 (+)
ENSDARG00000008886	msx1b	1: 49352900 ~ 49355313 (+)
ENSDARG00000059274	hoxd9a	9: 1964005 ~ 1965727 (-)
ENSDARG00000057859	hoxd10a	9: 1967707 ~ 1970071 (-)
ENSDARG00000059256	hoxd13a	9: 1986816 ~ 1990323 (-)
ENSDARG00000059263	hoxd12a	9: 1981882 ~ 1986014 (-)
ENSDARG00000059267	hoxd11a	9: 1975818 ~ 1978090 (-)
ENSDARG00000041071	jagn1a	9: 30108641 ~ 30111105 (+)
ENSDARG00000041051	mid1ip1a	9: 30263188 ~ 30264415 (-)
ENSDARG00000056561	asb11	9: 30364667 ~ 30371247 (-)
ENSDARG00000031678	col5a2a	9: 42653188 ~ 42696408 (-)
ENSDARG00000041339	zgc:92380	9: 48007081 ~ 48039964 (+)
ENSDARG00000099448	sh3d21	16: 35905031 ~ 35938157 (+)
ENSDARG00000025254	s100a10b	16: 23397785 ~ 23399484 (+)
ENSDARG00000007009	hoxa11b	16: 20904754 ~ 20907378 (+)
ENSDARG00000031337	hoxa10b	16: 20910186 ~ 20913003 (+)
ENSDARG00000036254	hoxa13b	16: 20895904 ~ 20897836 (+)
ENSDARG00000056819	hoxa9b	16: 20915319 ~ 20917584 (+)
ENSDARG00000040944	ntd5	16: 13568697 ~ 13595027 (-)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000089413	mbpb	16: 6803342 ~ 6849781 (-)
ENSDARG00000040482	osbpl3b	16: 21242491 ~ 21418775 (+)
ENSDARG00000079570	rspo2	16: 38453876 ~ 38553721 (-)
ENSDARG00000038006	osr2	16: 54402310 ~ 54405976 (-)
ENSDARG00000042027	prrx1b	20: 34511678 ~ 34521041 (+)
ENSDARG00000052652	fermt1	20: 45775935 ~ 45812152 (-)
ENSDARG00000041430	bmp2b	20: 45893173 ~ 45899149 (+)
ENSDARG00000068409	vgll4l	8: 31099264 ~ 31107537 (-)
ENSDARG00000000966	ncor2	8: 43379436 ~ 43574935 (-)
ENSDARG00000068575	tmem51a	8: 26701038 ~ 26709959 (-)
ENSDARG00000091902	b3gnt2b	17: 24036791 ~ 24082364 (+)
ENSDARG00000059247	tmem54a	17: 25326054 ~ 25342274 (+)
ENSDARG00000044001	lgals3b	17: 10824659 ~ 10838434 (-)
ENSDARG00000021896	asap3	17: 27186948 ~ 27235797 (-)
ENSDARG00000061405	eva1a	17: 32571584 ~ 32608521 (+)
ENSDARG00000104181	tmsb1	14: 12066695 ~ 12071679 (-)
ENSDARG00000100582	si:ch211-195b11.3	14: 38786258 ~ 38791884 (+)
ENSDARG00000036292	cdx4	14: 32961718 ~ 32965169 (-)
ENSDARG00000092970	tmsb2	14: 34486629 ~ 34488993 (+)
ENSDARG00000039579	cfd	13: 13681681 ~ 13684334 (+)
ENSDARG00000012972	cfl1l	13: 33606739 ~ 33609427 (+)
ENSDARG00000089795	sertad4	13: 31805824 ~ 31829786 (-)
ENSDARG00000014091	osr1	13: 32144370 ~ 32150443 (+)
ENSDARG00000020541	ism1	13: 34765141 ~ 34793487 (-)
ENSDARG00000010154	vstm4a	13: 30951155 ~ 30967784 (+)
ENSDARG00000040534	epcam	13: 8840772 ~ 8843363 (+)
ENSDARG00000056986	dact2	13: 43400443 ~ 43407199 (+)
ENSDARG00000015674	msx3	13: 24662238 ~ 24664668 (+)
ENSDARG00000086288	scg3	18: 39434589 ~ 39473055 (-)
ENSDARG00000061173	st14a	18: 44532199 ~ 44566188 (+)
ENSDARG00000007807	cyth3a	12: 17504559 ~ 17562703 (+)
ENSDARG00000045066	entpd1	12: 30740797 ~ 30777743 (-)
ENSDARG00000096750	BX001014.2	12: 27120117 ~ 27123577 (-)
ENSDARG00000052644	ca10a	12: 21298317 ~ 21553637 (+)
ENSDARG00000040513	zgc:92313	12: 4241458 ~ 4249000 (-)
ENSDARG00000106195	AL928656.1	12: 24214401 ~ 24214517 (+)
ENSDARG00000100312	hoxa13a	19: 19729506 ~ 19731291 (+)
ENSDARG00000011870	sp8a	19: 2315208 ~ 2318391 (-)
ENSDARG00000035890	fuca1.1	19: 32495419 ~ 32500373 (-)
ENSDARG00000020007	col1a2	19: 40983221 ~ 41002980 (+)
ENSDARG00000036834	krt92	19: 5349656 ~ 5352199 (-)
ENSDARG00000036832	cyt1l	19: 5356421 ~ 5358455 (-)
ENSDARG00000093684	tmem238a	19: 10331325 ~ 10333333 (+)
ENSDARG00000092947	cyt1	19: 5362420 ~ 5364649 (-)
ENSDARG00000009194	col16a1	19: 38473758 ~ 38611814 (-)
ENSDARG00000102906	hibadha	19: 19599528 ~ 19657539 (+)
ENSDARG00000097072	AL954322.2	15: 27356825 ~ 27364137 (-)
ENSDARG00000056134	c1qtnf5	15: 23369020 ~ 23376541 (-)
ENSDARG00000104267	postnb	15: 32710094 ~ 32741733 (+)
ENSDARG00000069476	spint2	15: 20239141 ~ 20250516 (+)
ENSDARG00000088091	pfn1	23: 44580254 ~ 44605765 (+)
ENSDARG00000054218	si:ch73-269m23.5	23: 44772661 ~ 44786844 (-)
ENSDARG00000013838	sulf2b	23: 15203822 ~ 15330230 (-)
ENSDARG00000058371	krt5	23: 10173196 ~ 10177458 (-)
ENSDARG00000070339	hoxc3a	23: 36087219 ~ 36149371 (+)
ENSDARG00000070351	hoxc11a	23: 36074798 ~ 36078132 (+)
ENSDARG00000070348	hoxc10a	23: 35969228 ~ 36086895 (+)
ENSDARG00000070346	hoxc8a	23: 36101185 ~ 36103635 (+)
ENSDARG00000070343	hoxc6a	23: 36115541 ~ 36116907 (+)
ENSDARG00000092809	hoxc9a	23: 36095260 ~ 36097488 (+)
ENSDARG00000097150	BX005254.4	23: 36092346 ~ 36095368 (-)
ENSDARG00000020811	efemp2b	21: 25588436 ~ 25604609 (-)
ENSDARG00000009544	cldnb	21: 25765734 ~ 25766840 (+)
ENSDARG00000069105	fgfr4	21: 37183124 ~ 37194839 (-)
ENSDARG00000101023	msx2b	21: 41144914 ~ 41147818 (-)
ENSDARG00000004875	tmc6b	11: 45219558 ~ 45244641 (+)
ENSDARG00000086216	prr13	11: 13179 ~ 18449 (-)
ENSDARG00000014047	cldn7b	10: 22144768 ~ 22150419 (-)
ENSDARG00000005108	oclna	10: 2924775 ~ 2943474 (-)
ENSDARG00000000804	rassf6	10: 13209580 ~ 13236012 (+)
ENSDARG00000026736	il11ra	10: 13305610 ~ 13396720 (-)
ENSDARG00000089645	si:ch1073-406l10.2	24: 33288455 ~ 33291784 (-)
ENSDARG00000022904	skilb	24: 26373341 ~ 26386627 (-)
ENSDARG00000101986	irf6	22: 1170294 ~ 1182165 (+)
ENSDARG00000002909	tjp3	22: 17657612 ~ 17688873 (-)
ENSDARG00000015123	dnase1l4.1	22: 5667371 ~ 5682494 (-)
ENSDARG00000057606	arl4ca	22: 13977772 ~ 13979393 (+)
ENSDARG00000103750	si:ch211-246m6.5	22: 14178813 ~ 14272699 (-)
ENSDARG00000003971	isl2a	25: 32746014 ~ 32751982 (-)
--	arhgef5	--
--	egfl6.1	--
--	pth2r	--
--	si:ch211-238n5.4	--
--	si:zfos-1011f11.1	--
--	fo904881.1	--
--	bx323084.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of SHFP.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE126647 (control)	Danio rerio	embryo	10	SHFP	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	ENSDARG00000104181 (tmsb1)	marker	DOI:10.1242/dev.185652
GSE126647 (control)	Danio rerio	embryo	13	SHFP	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	ENSDARG00000102178 (emilin2b)	marker	DOI:10.1242/dev.185652
GSE126647 (Pbx4-depleted)	Danio rerio	embryo	10	SHFP	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	ENSDARG00000104181 (tmsb1)	marker	DOI:10.1242/dev.185652
GSE126647 (Pbx4-depleted)	Danio rerio	embryo	13	SHFP	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	ENSDARG00000102178 (emilin2b)	marker	DOI:10.1242/dev.185652

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: SHFP

Distribution of SHFP in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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