Fish Single-cell RNA Database

GENE ID: ENSDARG00000088366

Symbol	Location	Gene type	Genome version	Species
zgc:77938	14: 35901249 ~ 35911982 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000088366 (zgc:77938), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000076933	aldh1a3	7: 9721385 ~ 9803154 (-)
ENSDARG00000053493	aldh1a2	7: 30326184 ~ 30367650 (-)
ENSDARG00000039501	ugt2a6	5: 69856153 ~ 69865574 (+)
ENSDARG00000035606	aldh3b2	5: 19477555 ~ 19488134 (+)
ENSDARG00000028087	aldh2.2	5: 69597166 ~ 69621227 (-)
ENSDARG00000110614	ugt2a7	5: 9405283 ~ 9406062 (+)
ENSDARG00000037935	aldh16a1	3: 32080403 ~ 32098515 (+)
ENSDARG00000018600	retsat	3: 39181387 ~ 39190317 (-)
ENSDARG00000070140	NA	3: 39191815 ~ 39198113 (-)
ENSDARG00000013839	aldh3b1	3: 34120191 ~ 34128952 (+)
ENSDARG00000092660	cyp27c1	6: 9568149 ~ 9581949 (-)
ENSDARG00000037061	aldh9a1b	2: 6067371 ~ 6092062 (+)
ENSDARG00000053518	adhfe1	2: 42095487 ~ 42109575 (-)
ENSDARG00000069834	pnpla4	1: 32097179 ~ 32111924 (-)
ENSDARG00000019496	esd	9: 25171662 ~ 25181697 (-)
ENSDARG00000076544	aldh5a1	16: 36934183 ~ 36945900 (-)
ENSDARG00000055331	aldh9a1a.2	8: 21082361 ~ 21091961 (-)
ENSDARG00000069100	aldh9a1a.1	8: 21094884 ~ 21103522 (-)
ENSDARG00000058048	ugt5e1	8: 14058646 ~ 14060244 (+)
ENSDARG00000088366	zgc:77938	14: 35901249 ~ 35911982 (+)
ENSDARG00000006372	ugt5c2	18: 40462445 ~ 40469527 (+)
ENSDARG00000054835	ugt5f1	18: 1249617 ~ 1270220 (-)
ENSDARG00000033999	cyp26a1	12: 8954761 ~ 8958353 (-)
ENSDARG00000028259	aldh3a2a	15: 20830146 ~ 20839910 (-)
ENSDARG00000074791	aldh3a1	15: 20799943 ~ 20809124 (+)
ENSDARG00000097491	ugt1b1	11: 30321116 ~ 30329055 (+)
ENSDARG00000089507	ugt1b5	11: 30303785 ~ 30330015 (+)
ENSDARG00000097231	ugt1b2	11: 30314885 ~ 30329055 (+)
ENSDARG00000097979	ugt1b3	11: 30310170 ~ 30329055 (+)
ENSDARG00000002394	ugt5d1	10: 25726694 ~ 25728744 (+)
ENSDARG00000043901	ugt5g2	10: 22082596 ~ 22086626 (-)
ENSDARG00000018426	aldh7a1	10: 16006905 ~ 16028082 (-)
ENSDARG00000020054	aox6	22: 14051245 ~ 14083583 (+)
ENSDARG00000093640	ugt5a2	25: 29401246 ~ 29415369 (-)
--	ugt2b5	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	Enterocytes (cluster: 2)	potential marker	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE123241 (fgf3 mutants)	neuromast	regeneration	5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000088366

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences