Fish Single-cell RNA Database

GENE ID: ENSDARG00000006911

Symbol	Location	Gene type	Genome version	Species
wnt8b	13: 29991090 ~ 30006260 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000006911 (wnt8b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000094973	wnt16	4: 10706755 ~ 10713584 (+)
ENSDARG00000054539	lrp10	7: 24153070 ~ 24162868 (+)
ENSDARG00000035521	sfrp1a	5: 27488975 ~ 27538745 (+)
ENSDARG00000056855	gatc	5: 20103085 ~ 20108469 (+)
ENSDARG00000037889	wnt9b	3: 37574885 ~ 37581620 (+)
ENSDARG00000009534	wls	2: 10342177 ~ 10386738 (-)
ENSDARG00000063437	wnt9a	2: 3201345 ~ 3271007 (+)
ENSDARG00000015266	mab21l2	1: 24076243 ~ 24078099 (+)
ENSDARG00000070050	sfrp2	1: 25491324 ~ 25496133 (-)
ENSDARG00000060004	fzd7a	9: 13352308 ~ 13355071 (-)
ENSDARG00000073935	wnt6b	9: 11281969 ~ 11341315 (+)
ENSDARG00000017155	wnt10a	9: 11379782 ~ 11409691 (+)
ENSDARG00000008765	tmed5	20: 14789148 ~ 14806671 (+)
ENSDARG00000032234	wnt2bb	8: 27743550 ~ 27768785 (+)
ENSDARG00000052455	porcnl	8: 22544290 ~ 22558773 (-)
ENSDARG00000052910	wnt8a	14: 34490445 ~ 34494899 (+)
ENSDARG00000006911	wnt8b	13: 29991090 ~ 30006260 (-)
ENSDARG00000022503	pkd2l1	13: 25455319 ~ 25471376 (+)
ENSDARG00000039041	sfrp5	13: 39911551 ~ 39947335 (-)
ENSDARG00000041117	wnt2	18: 20613241 ~ 20636549 (-)
ENSDARG00000038990	wnt3	12: 22258962 ~ 22304841 (+)
ENSDARG00000087814	mfrp	15: 464229 ~ 477223 (-)
ENSDARG00000089563	sfrp2l	15: 47811725 ~ 47822597 (-)
ENSDARG00000040925	wnt10b	23: 27641471 ~ 27647769 (-)
ENSDARG00000070677	fezf2	11: 20056732 ~ 20059407 (+)
ENSDARG00000071208	wnt4	11: 39167846 ~ 39202915 (-)
ENSDARG00000044827	wnt7aa	11: 27486584 ~ 27501027 (-)
ENSDARG00000057678	sfrp1b	10: 20351413 ~ 20357013 (-)
ENSDARG00000014796	wnt11	10: 32104305 ~ 32123204 (+)
ENSDARG00000003429	hnrnpdl	10: 5017216 ~ 5024520 (-)
ENSDARG00000045444	fzd8a	24: 4447635 ~ 4450238 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment	Midbrain (cluster: 2)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	Placode Trigeminal (cluster: 5)	potential marker	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	Muller glia cells (cluster: 5)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
GSE158142 (2dpf)	head	baseline	2dpf, untreatment
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000006911

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences