Fish Single-cell RNA Database

GENE ID: ENSDARG00000053862

Symbol	Location	Gene type	Genome version	Species
crygmx	12: 30838167 ~ 30841679 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000053862 (crygmx), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000090428	ctrb1	7: 35075847 ~ 35079299 (+)
ENSDARG00000033382	grifin	3: 41784542 ~ 41795917 (-)
ENSDARG00000000638	opn1mw4	6: 41200500 ~ 41202554 (+)
ENSDARG00000078318	tmod1	1: 12231478 ~ 12257979 (+)
ENSDARG00000016793	crybb1l2	1: 44439661 ~ 44448387 (+)
ENSDARG00000091660	fgfbp1b	1: 22677429 ~ 22678471 (-)
ENSDARG00000069826	crygm2d15	9: 22116600 ~ 22117430 (-)
ENSDARG00000087301	crygm2d14	9: 22146301 ~ 22158784 (-)
ENSDARG00000087765	crygm2d10	9: 22309838 ~ 22310919 (-)
ENSDARG00000086917	crygm2d2	9: 22317479 ~ 22318511 (-)
ENSDARG00000087324	crygm2d1	9: 22338578 ~ 22339582 (-)
ENSDARG00000007099	cx43.4	9: 46405587 ~ 46415847 (-)
ENSDARG00000032431	mpv17	20: 38671894 ~ 38716529 (+)
ENSDARG00000079687	rnf10	8: 41256612 ~ 41273768 (-)
ENSDARG00000017773	slc16a12a	17: 23578316 ~ 23596969 (+)
ENSDARG00000007576	crybb1l1	14: 46301973 ~ 46310549 (-)
ENSDARG00000039963	fgfbp1b	14: 46441617 ~ 46442459 (-)
ENSDARG00000068406	six5	18: 37245331 ~ 37252036 (-)
ENSDARG00000053862	crygmx	12: 30838167 ~ 30841679 (-)
ENSDARG00000102995	rbm24a	19: 46113828 ~ 46148977 (+)
ENSDARG00000056739	tas1r1	23: 21424747 ~ 21440054 (+)
ENSDARG00000013963	mipb	23: 6637611 ~ 6641223 (-)
ENSDARG00000007715	lgsn	11: 11263451 ~ 11266882 (-)
ENSDARG00000059015	lim2.2	22: 3223489 ~ 3232634 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Lens (cluster: 25)	potential marker	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	Lens (cluster: 23)	potential marker	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	Lens (cluster: 29)	potential marker	NA
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	Horizontal cells (cluster: 9)	potential marker	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA734348 (shield, control)	embryo	baseline	6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE158142 (12hpf)	head	baseline	12hpf, 6 somites, untreatment
GSE158142 (14hpf)	head	baseline	14hpf, 10 somites, untreatment
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (20hpf)	head	baseline	20hpf, 21-22 somites, untreatment
GSE158142 (24hpf)	head	baseline	24hpf, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
GSE158142 (2dpf)	head	baseline	2dpf, untreatment
GSE158142 (3dpf)	head	baseline	3dpf, untreatment
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000053862

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences