CI01000057_05927908_05930891


Basic Information

Item Value
gene id CI01000057_05927908_05930891
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5927908 ~ 5931845 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05927908_05930891.mRNA
CAAGAAACCCACAAAGGTGCCTTTACATCCACCACCGAATAGTGGCATCAGCCTGTCATCTGAAACTGACTCTCAGCAAAGATTAAGAAGGACAAGACCTGACAAAATGTTGATCATGGCGAACACCACAAACAGGCAACATAACACCAAGATCAAATCTCATATGACTTCCAAAAATGGACAAAAGGAGAGGCGACAAAGACCAAACAGCAGTGGTGCAAAAGAGAGTGGTGGCAGGGGTAGAAGTTCAAGTGTAAGGCCTGTAAAGGTGCAGAGAGAAGACTCTTCAGAGCGCAGAACCCAAGACGAGGGCTGTACACCGCGAAGTAAACCTGGAGACGAGGACAGCGCCAGTGACCTCTCTGATTCTGAAAGATATTCTGCGTTTCCCGCTCAAATTTCTCCGCCTGACCTCAACCTGCGTGCAGAGGTCATAGACCCGTCTGACTTTCATCCCTCCAGACCTGCTTGTCGAGGGCAGGACAGGTTCAGAGGAAGCTATCCAGATTTCCTGCCGCCTCCTTTCAATTCTTGGAGTCTCAAACAGTTAGCGGTGTACTTGAACACCGACGGCAAGAGCACTCCTCGGCCCAAGCCCGTCGGGCAGCTCGAGAGATACTTGGACCGGCTATTGCAGATGGAATGGCATCAGATCCAAAGTGTCCAAGACGACAGCAGCAAATCCAACGCCCCAGTACCTAAAGGTCGCCGCTTACCTCATTCATCTTCTCATCTCAGCCTCAGCTCTCCTAAATGTATCCTCCAGTGTCAGCGCGCGTTCCCTTTGACGCTCCTGTCCTCTTTGGCCAGTGCTCCCGCCCTTCAGCTTTCAAGCTGTACCTGTCCACATTGCCAGAATCAGTATGCCGTCTTGAACGGATCGTGCCGCTCTTATGCCTACCATCACCACACACGGTTGAGTCCACTCCTGGAGAAGAAGCGCCAGGCCTCAGGTTTGCCTAAACGGAGCAGCAGCGAGAGCAGGGCTCATCAGCTGGAACCCAGACTCAGATCCCGCGAGCACAGACTCAGCGACCCTCTGAGCGAGAGCAGACACTTGAGGCGCATGCAGGCTGTCGGGAACATTCGCAATCCTGCTGCTTCCACATACAGCTCGGACCAAGCTTCTACTGCAGCTACAACTGACAGTATCGGTGATGTGAAAAAGAGGAGTCGTTCCTGTGTGGGCGTGAGCGAGGCTGGCTTTAGGGCACGAGGACGCAGCGAACAAGGGAAGAGCTCAGATAAAACACAGCAGGACTCAGAACTGTCTTGTGCTGTATGTTCAGATGGGTTACAAAGATCGAAAGACTCTGCAACTAGTCGACTGACCCGGAAGCAGAAACACGTTGAATTTGTCACAAAGTAACTTCAATACAGTGACCTGGAAAACTTACTGTAAAATGAATGAATTTCATTGATAAAAGAATATCAAGCCAAGTTACGAGAAATTTGTGCAGTGACATTTACAGTGTGCAACAGATCCCTGTTATTTTAGTGAATGTATGAAGTCAGTTCATCACATGATGTTACACTAACGTTTTGCAAACAAATTCATAAGGAAAAAAATATATATAAACAATAAATCAGCTACTTATTGGATTCCAAGTGATCAAGGGCTTAGGGTGTTCCATTTAAACACATTTCAAGGGTTCCGCCAGTAGTGGGCGCTCGTGCAACGTAAGCAATGACGTACATCCGAGTGAACGAGACGGAGGGAAGTTAGCGAGAAAAAGGCATAAAAAAGTGGACTTAAATACAGCCACGTTCTTTTCTGTGTATAAATACGAATAACCGACGCAATTATTAGTAAATGAGACCCAATCTTTTTAGTGGTTTAAAGGTCCGTTCGCGCTAAGAATGCTAATGCTAATGAAAACAAAGATATCATTTAAAAAAAAACATTGTAAATATGAAAGAATAGCAGAGTTCACACCACAACTATAACGACACAGAGGAACGATATCGTTGGAATCGCTTTCAGAATGATTTGTTTCCAGCTGATGAACGATAAAAACATTGACAGCCAATCAGAATCCATCCTGCTTTAAAGAGCTCGAGCATTTAACTTTATAGTTATCATCTTTAACTTTATAGTTATCATTCTTGGTGTGAACGGGCCTTTAAGCCTCTTCAGTTCAGCACAACCATTTTGCCTGTTTATGACTGCATTATTTTAAAAATGAAGTTTAAGTTGTGTTTCAGTAGAACTCTATGCATGTTTATTTGTTTAAATTCTTATTTTTAGTAACTGTTCTTTTATTGTTTGTAATAGCAGTATATCTACATTAATATCTCTGAAGCATCTTTTATCAGCGCTTAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05927908_05930891.mRNA True 2323 mRNA 0.45 3 5927908 5931845

Neighbor

gene id symbol gene type direction distance location
CI01000057_05912175_05916639 NA coding upstream 11174 5911767 ~ 5917211 (+)
CI01000057_05884073_05908410 NA coding upstream 19474 5884073 ~ 5908434 (+)
CI01000057_05840771_05841346 NA coding upstream 86396 5840578 ~ 5841512 (+)
CI01000057_05776252_05786478 NA coding upstream 140330 5774308 ~ 5787578 (+)
CI01000057_05764224_05772045 DUSP7 coding upstream 155863 5764224 ~ 5772045 (+)
CI01000057_05933567_05935825 NA coding downstream 1722 5933567 ~ 5936062 (+)
G245933 NA non-coding upstream 90071 5837608 ~ 5837837 (+)
G245880 NA non-coding upstream 97500 5828182 ~ 5830408 (+)
G245878 NA non-coding upstream 100068 5823728 ~ 5827840 (+)
G245838 NA non-coding upstream 374291 5548919 ~ 5553617 (+)
CI01000057_05535136_05545646 NA non-coding upstream 375619 5533651 ~ 5547218 (+)
G245940 NA non-coding downstream 14607 5946452 ~ 5946689 (+)
G245883 NA non-coding downstream 20948 5952793 ~ 5961077 (+)
G245943 NA non-coding downstream 31445 5963290 ~ 5963512 (+)
G245948 NA non-coding downstream 36019 5967864 ~ 5968226 (+)
G245949 NA non-coding downstream 41120 5972965 ~ 5973209 (+)
G245857 NA other upstream 270669 5655276 ~ 5657239 (+)
G245856 NA other upstream 284568 5637654 ~ 5643340 (+)
CI01000057_05564489_05579041 NA other upstream 348065 5564489 ~ 5579843 (+)
G245725 NA other upstream 824302 5098685 ~ 5103606 (+)

Expression


Co-expression Network