G245933


Basic Information

Item Value
gene id G245933
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5837608 ~ 5837837 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU279162
TTTTTGTCATTTTTGACCAGGGAACACCACAAGTGTAACAAGGTGGGGGGAAAAAAATCCCCCAAAAAAGTACAAAAATTATCAAAAAAAATGTTGTGAAGTAGTTTTTCCCTGTGTGAACAAAGTTTTAGTCCAATGCGATAACATTAACTAACATTTTCAGTAAAAATGAACCGAACACATGTTATGATTTAGTATTTCTCCTCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU279162 True 209 lncRNA 0.34 2 5837608 5837837

Neighbor

gene id symbol gene type direction distance location
CI01000057_05776252_05786478 NA coding upstream 50030 5774308 ~ 5787578 (+)
CI01000057_05764224_05772045 DUSP7 coding upstream 65563 5764224 ~ 5772045 (+)
CI01000057_05700512_05711609 POC1A.L, POC1A coding upstream 125855 5700512 ~ 5711753 (+)
CI01000057_05678941_05683978 ALAS1 coding upstream 153586 5678941 ~ 5684022 (+)
CI01000057_05664038_05668068 SLC11A2, NRAMP-ALPHA coding upstream 169443 5664038 ~ 5668165 (+)
CI01000057_05840771_05841346 NA coding downstream 2741 5840578 ~ 5841512 (+)
CI01000057_05884073_05908410 NA coding downstream 46236 5884073 ~ 5908434 (+)
CI01000057_05912175_05916639 NA coding downstream 73930 5911767 ~ 5917211 (+)
CI01000057_05927908_05930891 NA coding downstream 90071 5927908 ~ 5931845 (+)
CI01000057_05933567_05935825 NA coding downstream 95730 5933567 ~ 5936062 (+)
G245880 NA non-coding upstream 7200 5828182 ~ 5830408 (+)
G245878 NA non-coding upstream 9768 5823728 ~ 5827840 (+)
G245838 NA non-coding upstream 283991 5548919 ~ 5553617 (+)
CI01000057_05535136_05545646 NA non-coding upstream 285319 5533651 ~ 5547218 (+)
G245843 NA non-coding upstream 314539 5506979 ~ 5523069 (+)
G245940 NA non-coding downstream 108615 5946452 ~ 5946689 (+)
G245883 NA non-coding downstream 114956 5952793 ~ 5961077 (+)
G245943 NA non-coding downstream 125453 5963290 ~ 5963512 (+)
G245948 NA non-coding downstream 130027 5967864 ~ 5968226 (+)
G245949 NA non-coding downstream 135128 5972965 ~ 5973209 (+)
G245857 NA other upstream 180369 5655276 ~ 5657239 (+)
G245856 NA other upstream 194268 5637654 ~ 5643340 (+)
CI01000057_05564489_05579041 NA other upstream 257765 5564489 ~ 5579843 (+)
G245725 NA other upstream 734002 5098685 ~ 5103606 (+)
G245486 NA other upstream 1625527 4209897 ~ 4212081 (+)

Expression


Co-expression Network