CI01000057_05764224_05772045 (DUSP7)


Basic Information

Item Value
gene id CI01000057_05764224_05772045
gene name DUSP7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5764224 ~ 5772045 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05764224_05772045.mRNA
ATGTCGAGCAAAAGCGCGGAATGGCTGCAGGATGAGCTGCAGTCCGGCGGCGGCTCGCTGCTGCTGCTCGACTGCCGCTCGCACGAGCTCTTCGAGTCCTCGCACATCGAGTCCGCCATCAACCTGGCCATTCCGGGACTCATGCTGCGGAGGCTGAAGAAGGGCAACCTGCCCATCCGCTCCATCATCCCCAATAACGAGGACAAGGAGAAGTTCGTCAAGCGCTGTAAGACGGACACGGTGCTGCTGTACGACGAGGCGACGGCGGACTGGCAGGAGAGCGGCGCCGCGGGCTCCGTGCTCGGGCTCCTCATGCAGAAGCTCCGCGATGACGGCTTGTTTGTTATCTGGCATGTTCCAGGAGGATTTAACAAGTTTCAGACTGAATACCCAGAGCACTGCGAGACTAACTTGGACTGCTCCTGTCCGAGCAGCTCTCCGCCCTCGTCCGTTCTGGGTCTGGGTGGACTGCGGATCAGTTCGGACTGTTCCGACGGTGAGTCGGACCGGGAGCCGGGCAGTGCCACGGAGTCCGAGGGCAGCCCCTTACCCAGTAACCAACCAGCATTCCCAGTCCAGATTTTACCGTATCTTTACCTGGGCTGTGCCAAAGACTCCACCAACCTGGACGTTCTGGGCAAGTACAACATCAAGTACATCCTGAACGTGACTCCCAACCTGCCCAACATGTTTGAACACGACGGGGAATTCAAGTACAAACAAATTCCCATCTCTGATCACTGGAGCCAAAACCTCTCTCAGTTTTTCCCAGAAGCCATTTCTTTCATAGATGAAGCTCGTTCCAAAAAGTGTGGCATCTTGGTGCACTGCCTAGCAGGCATCAGTCGCTCGGTCACCGTCACGGTGGCGTACCTGATGCAGAAGCTCAACCTGTCGCTCAACGACGCCTACGATTTCGTCAAGCGCAAGAAGTCCAACATCTCGCCCAACTTCAACTTCATGGGGCAGCTCTTGGACTTCGAGAGGACACTGGGGCTCAACAGCCCCTGCGACAACCGCTCGCCCAACGACCAGCTCTTCTTCACCACGCCGACCAATCACAACATGTTCCAGCTGGACACGCTGGAGTCCACA

Function

symbol description
dusp7 Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity; mitogen-activated protein kinase binding activity; and protein tyrosine/threonine phosphatase activity. Predicted to be involved in peptidyl-threonine dephosphorylation and peptidyl-tyrosine dephosphorylation. Predicted to act upstream of or within dephosphorylation. Predicted to be active in cytosol. Is expressed in cranial ganglion and trigeminal placode. Orthologous to human DUSP7 (dual specificity phosphatase 7).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K04459 DUSP, MKP; dual specificity MAP kinase phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05764224_05772045.mRNA True 1095 mRNA 0.57 3 5764224 5772045

Neighbor

gene id symbol gene type direction distance location
CI01000057_05700512_05711609 POC1A.L, POC1A coding upstream 52471 5700512 ~ 5711753 (+)
CI01000057_05678941_05683978 ALAS1 coding upstream 80202 5678941 ~ 5684022 (+)
CI01000057_05664038_05668068 SLC11A2, NRAMP-ALPHA coding upstream 96059 5664038 ~ 5668165 (+)
CI01000057_05626464_05631670 NA coding upstream 132423 5626464 ~ 5631801 (+)
CI01000057_05596837_05615278 PPARG coding upstream 148214 5596837 ~ 5616010 (+)
CI01000057_05776252_05786478 NA coding downstream 2263 5774308 ~ 5787578 (+)
CI01000057_05840771_05841346 NA coding downstream 68533 5840578 ~ 5841512 (+)
CI01000057_05884073_05908410 NA coding downstream 112028 5884073 ~ 5908434 (+)
CI01000057_05912175_05916639 NA coding downstream 139722 5911767 ~ 5917211 (+)
CI01000057_05927908_05930891 NA coding downstream 155863 5927908 ~ 5931845 (+)
G245838 NA non-coding upstream 210607 5548919 ~ 5553617 (+)
CI01000057_05535136_05545646 NA non-coding upstream 211935 5533651 ~ 5547218 (+)
G245843 NA non-coding upstream 241155 5506979 ~ 5523069 (+)
G245834 NA non-coding upstream 279813 5484204 ~ 5484411 (+)
G245833 NA non-coding upstream 280262 5483734 ~ 5483962 (+)
G245878 NA non-coding downstream 51683 5823728 ~ 5827840 (+)
G245880 NA non-coding downstream 56137 5828182 ~ 5830408 (+)
G245933 NA non-coding downstream 65563 5837608 ~ 5837837 (+)
G245940 NA non-coding downstream 174407 5946452 ~ 5946689 (+)
G245883 NA non-coding downstream 180748 5952793 ~ 5961077 (+)
G245857 NA other upstream 106985 5655276 ~ 5657239 (+)
G245856 NA other upstream 120884 5637654 ~ 5643340 (+)
CI01000057_05564489_05579041 NA other upstream 184381 5564489 ~ 5579843 (+)
G245725 NA other upstream 660618 5098685 ~ 5103606 (+)
G245486 NA other upstream 1552143 4209897 ~ 4212081 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003782 dusp7 coding NC_007122.7 CM002895.2 220544 ~ 236766 (-)
bowfin (Amia calva) AMCG00017177 dusp7,LOC107712495,LOC107677944 coding CM030122.1 CM030122.1 49579589 ~ 49589402 (-)