CI01000057_05776252_05786478


Basic Information

Item Value
gene id CI01000057_05776252_05786478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 5774308 ~ 5787578 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_05776252_05786478.mRNA
CTATAAAAAGATGACCAGAAATATCCCCAGACCATTAACCACCTCCAGATCAACTAAACGCTCTCTGTTAGGATCTGCCATGTTTCTCCTGTAAATGTTGGTCTTATCTTTCCCTCTTGTTCATGACTCTGACCTTTTCTTGGAAAACGGCACCTCACGGGTGTCTTTCTGTAACATGAATCCTACATGAGGTGAGACTTCCTCCCCCCCGCCCACTTGGTTTCCTGTTGCCTTGTGGTTAATTTCAGATACAGATGGTTTCTGAAGCATGTGATGACACCACATCCGATTGCTGAAACGATCACCGCTCTGCTTCCTCTTCGTAACCCAAGTCAAGTCATGTTTATTTATATAGCGCTTCATACCGTACAGATTGCTTCAAAGCAGCCTTACATAACAAACAGGAAAAACAGTCAGTGTTGCCCAATTCTTCAATCAGGAATCTGTCATTTCAGTTTTAATTGCAACTTCAGTTTTCAACTATATGAAGCTCTACAGAAGACAATATGGTGTTCATGAACTGAATATTAATAGTTTTTTACTATTAAGTAAGCTAAAGTTCAATGGTGGCAAGGAACCAAACATCATTTGATGAACGTCAGCATCAATGATGGTTTCACACTACAGCACACGTCCTCTTTTTGGTTTATTTTTATAGAATGAGTGCAAAATTTGACTGTTTTAAAGGTCAGTGTGATATGCACAGAGATTGGGCGCTTACTGGTGTTTCCTTTGTCAGATTTACTCTTTGAGTTGTGCCGCATGAAATTTTAGATGTACAGTATTAGATGAATTAGGCTTTGTTGCACTGAAGCATTGTGAAATTGTTTCTTACGTTTGGGTAAAAGTTGCTTGAAGAAGCAAATATTACTTTTGGGTGTCTATTTCAAGGATCGTCAGGTTACGGAGAATGTAAGACATGCTAAGATGAATGCGTTCAGCCTGTCTTTTTGAGTTCATTGTTTAAGAACAAGTGGGAACCTGTCATGTTGAGTGGTAAGGGGAGATTTCTTATGAGAAGCGGTTGGGATGTTCACCTTGATTATGGTTTGACGTGAGTGGAGGGCGTTCTTTGTAAGTCAGGAACGGTTAAAAGCACCAAACATTCCCACAAATGCATGCTGCAATTCACCAATACAGAATTGCGAGATATAAACTCACAACTACGAGAAATAAATTCAGAATTGTGAGATACAAACACAACTGCGAGAAATAAAGTCAGCATTATAATATAAACTCGCATTTGTGGAAAAATAGTCCGATTTACGAGAAATAAAGTCAAAATTGAGATATAAACTTGCAACTGAGAAATAAAGTCTGAATTGTGAGAAATAGATTTATGAGAAATAAAAGAATTGAGATATAAACTTGCATTTGCAAAAAAAATAAAGTCAGAATTACAAGTTATAAACTCGTAACTCCGAAAAATAGTCATAATTGTGAGAAATAAAGTCAAAATTGTGAGACAAAGTCAGAATTGCGTGATATAAAGTCATTGTTTTTATTTTGCTGGTGAAACACTAATCTACATTAGTCCCTCTGCCACGGCTGCCTTTTCACCATATAAATGAACTTAGATATTCTAATTATTTGTCTAAACTCCTAAAAAATACAGACTTTCTTTTCTCTCTATGAGTCCAGTGAGGTTCTTCAATCACGGCAGCGTTAACAATCATACTATCAACAGTTAGCGGCTGATGGGTTAGTAGTTGTTGAACAGCGTACTACGATGACACCTTCACACAGATTCATTCACACCACACTAACAGAGCGAAGGAAAGCAGTGCTAATTAAAGCTAAGTGAATATAGTGTAGTGTTCAAAACATGATTCATGCGGAGTGCAAAAATAACTACTTAAAGAGACTTGCTTTTGAATATACTCTAAATTTGAAGCTATGCAACAAGTACACGGGGGTTAATTAACTGAAGACGAGTTACACATCATGAACCGAGACGTACAGCAACCATTACAATCTGCTACTGATAACCTCGAGCTCGTAGAGGAAACAAAAGCAGATGATCAATCAAATCGAATGTCCAGATGTGTGATCTGGATCCTCTTCTTGTGCTTGAGCACAATGATAACCGTACCTAAACCAGGTCACAAGTGTCTTGAGTTTGTGATTATGCAACATGATGATCAGCATAACAAGCCTAGTGTTAATGGAAGAGCCTCTGCTATGAGGTTGTGCCTTTTACAAATGAGAAAAGTTAGCTCTCCCTGGTTACATAAAGCTGGCGTGGCACAGTACCAACGCCCTGCAGGAACAATACAAGAGATCGTGACGGCCCCTCAGCCCGATCAGGTCAGATGGACACGAAGGGTAAGCATCTTTCTCTTCTCTCATCTCAAATCAATTAGTCTGACCTGCTGCCTTGTTGTAATCCTCGTTTATGAGGCTGTTTTCATCATGCGTGCGTGGCAGAGCATCTGGCTGAAGGACAGCAAACATGCGTGTGATACAGCTAGAGCGTCTTCACATCCAGACTTCAGTCATCTCAGGAGGAAGGAAGTGCAGGTTATGGTTTTGCTGAGATCAGTAGAAAGCGGACATGACTTTGCTGTGTTTGTCACAAATAGAGGAACAGCGATGCTTCTCCTTCCTTCCATGTCACTGACAGAGACTCCTCCACATGCAGGAAGCCTTCGCTGGCAGGAGTGTGGGATAGTAAGATATGACACAGGAAAACAGAGGTTTGTGAAGGCCGGGACTGAGTTTTCACATCTCAGCTGTTGGAATATGTGTGAGCTGAAAGTGCAGCAGTCGTGTGAATATGGCGGCGTCTCAAAGCAGATGCACATTAATGTTGATATAACCGTCCGACGGCTGACGCTCTCATATGAATAAACATATGCTGGTACTATGCATCTGATATGTTCATCAGTGTATGTGTTTAATTTAATTTTCCTGGCTTTAATTTTTCTGCTCAGTAGATTACAAATAACATGACGAAAATTGCTTTTAGTAACGTAATGTTTTGCATTACACATTTTAGGTAGGCCTAATGTATTCGGATTACTTTCTGATTACTTTTAGATTACTTTTGACCCAGCTCATTTATCACATAGTGAGTGAATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTTATTCCAGCACTCACAGACTGAAGACCTGCCGGCGTTTAAGATGCTGCGCTGTAATAATTCATGCGCTTTCATCGGCCAACAAGTACATGAGCTCCTAAAAGCCACATTACATAATCTCCATCTCCACATCTACTCTCAGAGGAAGCGCAATATGGAAATGAATGAGAATCATGATCTTGTTTATAATATAAGGCATTTTTATGTGCTGTTTTGATCCTCATCTATGCTGTAATGTAATTAGAGACTACATTTAGCATCTTTTTATATTAATTATGATATATTCTCACATGGTTATTGCAGCAGACAGGATTATAACAGGCTTAATTGTTTTTTTTATTGGTGTGTTTATTGTCACATGATCACGAGTAGAAATGATCAAAGCTCAGTTTGGTGTGTAATGAATGAGATGTGTCTTCAGCGTAATCCTGTTTCAAGCTCTCGATGTGTTCTTCTAGAACACAAACCTCCTCATATTCTGTAATTCCTGCCTTCGTTATTAAACATGCAACCCAGCGCCATTTTTCTTCTCCAGTAAATGTATCTTGATTTAAGAATGTTTAGATATTTGTGCTGGAAAACAAGACAGAAACACTGAGGAAGAACATCATGTTTAGCAGTGCGTCCCTGTATGTTTGTGTATATATTGCCTTCTGTTTCTGTTTTCATTTTTGAATGTGGACGTGTGGTTCATTCAGATGAATAATGTATGAATAGTTGATAAATGTGATAAAGTGAAGGGGACGTTCTGAACCCTAATTAAACTGAATGCTGGGACTGTGTGTTCCCGTCTGTTCATCAGACACGCATGTGTCCAGATACATGTTCACTGAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_05776252_05786478.mRNA True 3950 mRNA 0.39 6 5774308 5787578

Neighbor

gene id symbol gene type direction distance location
CI01000057_05764224_05772045 DUSP7 coding upstream 2263 5764224 ~ 5772045 (+)
CI01000057_05700512_05711609 POC1A.L, POC1A coding upstream 62555 5700512 ~ 5711753 (+)
CI01000057_05678941_05683978 ALAS1 coding upstream 90286 5678941 ~ 5684022 (+)
CI01000057_05664038_05668068 SLC11A2, NRAMP-ALPHA coding upstream 106143 5664038 ~ 5668165 (+)
CI01000057_05626464_05631670 NA coding upstream 142507 5626464 ~ 5631801 (+)
CI01000057_05840771_05841346 NA coding downstream 53000 5840578 ~ 5841512 (+)
CI01000057_05884073_05908410 NA coding downstream 96495 5884073 ~ 5908434 (+)
CI01000057_05912175_05916639 NA coding downstream 124189 5911767 ~ 5917211 (+)
CI01000057_05927908_05930891 NA coding downstream 140330 5927908 ~ 5931845 (+)
CI01000057_05933567_05935825 NA coding downstream 145989 5933567 ~ 5936062 (+)
G245838 NA non-coding upstream 220691 5548919 ~ 5553617 (+)
CI01000057_05535136_05545646 NA non-coding upstream 222019 5533651 ~ 5547218 (+)
G245843 NA non-coding upstream 251239 5506979 ~ 5523069 (+)
G245834 NA non-coding upstream 289897 5484204 ~ 5484411 (+)
G245833 NA non-coding upstream 290346 5483734 ~ 5483962 (+)
G245878 NA non-coding downstream 36150 5823728 ~ 5827840 (+)
G245880 NA non-coding downstream 40604 5828182 ~ 5830408 (+)
G245933 NA non-coding downstream 50030 5837608 ~ 5837837 (+)
G245940 NA non-coding downstream 158874 5946452 ~ 5946689 (+)
G245883 NA non-coding downstream 165215 5952793 ~ 5961077 (+)
G245857 NA other upstream 117069 5655276 ~ 5657239 (+)
G245856 NA other upstream 130968 5637654 ~ 5643340 (+)
CI01000057_05564489_05579041 NA other upstream 194465 5564489 ~ 5579843 (+)
G245725 NA other upstream 670702 5098685 ~ 5103606 (+)
G245486 NA other upstream 1562227 4209897 ~ 4212081 (+)

Expression


Co-expression Network