Gene
RNA
| Item | Value |
|---|---|
| gene id | G245151 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000057 |
| NCBI id | null |
| chromosome length | 6014843 |
| location | 2929005 ~ 2931066 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU278290 | True | 2033 | lncRNA | 0.38 | 2 | 2929005 | 2931066 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000057_02884788_02888727 | NA | coding | upstream | 40200 | 2884081 ~ 2888805 (+) |
| CI01000057_02794112_02799150 | NA | coding | upstream | 129852 | 2793991 ~ 2799153 (+) |
| CI01000057_02758170_02782493 | CAMK1A, CAMK1.L, CAMK1B, CAMK1 | coding | upstream | 146439 | 2758170 ~ 2782566 (+) |
| CI01000057_02707814_02708251 | NA | coding | upstream | 220631 | 2707814 ~ 2708374 (+) |
| CI01000057_02693930_02700711 | GNL3 | coding | upstream | 228294 | 2693930 ~ 2700711 (+) |
| CI01000057_03326630_03330891 | NA | coding | downstream | 393653 | 3324719 ~ 3331089 (+) |
| CI01000057_03496993_03600733 | PTPRG, PTPRGA | coding | downstream | 565927 | 3496993 ~ 3600733 (+) |
| CI01000057_03611693_03627832 | CSE1L | coding | downstream | 680627 | 3611693 ~ 3628414 (+) |
| CI01000057_03636623_03639946 | NA | coding | downstream | 705557 | 3636623 ~ 3640129 (+) |
| CI01000057_03652858_03668897 | NA | coding | downstream | 721740 | 3652806 ~ 3669092 (+) |
| G245145 | NA | non-coding | upstream | 3751 | 2925019 ~ 2925254 (+) |
| G245107 | NA | non-coding | upstream | 45293 | 2883474 ~ 2883712 (+) |
| G245103 | NA | non-coding | upstream | 52281 | 2876485 ~ 2876724 (+) |
| G244070 | NA | non-coding | upstream | 92656 | 2836080 ~ 2836349 (+) |
| G244069 | NA | non-coding | upstream | 92953 | 2835808 ~ 2836052 (+) |
| G245189 | NA | non-coding | downstream | 53523 | 2984589 ~ 2984808 (+) |
| G245195 | NA | non-coding | downstream | 73726 | 3004792 ~ 3005010 (+) |
| G245196 | NA | non-coding | downstream | 76611 | 3007677 ~ 3007924 (+) |
| G245199 | NA | non-coding | downstream | 82065 | 3013131 ~ 3084371 (+) |
| G245200 | NA | non-coding | downstream | 87490 | 3018556 ~ 3041054 (+) |
| G243991 | NA | other | upstream | 276445 | 2635237 ~ 2652560 (+) |
| G243975 | NA | other | upstream | 352153 | 2576453 ~ 2576852 (+) |
| CI01000057_02395285_02396439 | NA | other | upstream | 532523 | 2394598 ~ 2396561 (+) |
| G243558 | NA | other | upstream | 1970634 | 956063 ~ 958371 (+) |
| G243557 | NA | other | upstream | 1973810 | 954843 ~ 955195 (+) |
| G245231 | NA | other | downstream | 156030 | 3087096 ~ 3292562 (+) |
| G245401 | NA | other | downstream | 606503 | 3537569 ~ 3538442 (+) |
| CI01000057_03842028_03844033 | NDUFS7.S, MGC85267, NDUFS7 | other | downstream | 910962 | 3842028 ~ 3844691 (+) |
| G245486 | NA | other | downstream | 1278831 | 4209897 ~ 4212081 (+) |
| G245725 | NA | other | downstream | 2167619 | 5098685 ~ 5103606 (+) |
