CI01000057_03652858_03668897


Basic Information

Item Value
gene id CI01000057_03652858_03668897
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 3652806 ~ 3669092 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_03652858_03668897.mRNA
GTATTTATGACCATTATAAAAAAAATTTCCAGGCACTTCTTCTGTTTCTGTGATGCTGAATCACCCAATTTCACTTCCATGTGGCCATGGTGAAAAAGTTGTGTGGCGCAAGGTCATCCCCATCAACGCAAATGTTGCTGAATGCCAAAATGAGAAATGTGTTGTAAACGAAAGTTTTAGGCAAAGATTTGCAGTCATGCATGAAAAAAATTACACTCTATTTCTCAAGTCAGCAAAATACAATGACCAGGGGCAATATGTGTGCAGTCGTGATGGCATTGACAAGCATTTTAAACTGGAAGTTGTCGCTGTTGAGTCAGAAAATATCACTCTTCCATGTTATGCGGATACTCAAAGCAATGTCAGAGATGTGACGTGGCTCCATGATGAGCAAAAAATTCTGCACTACAGTACAAATGGAGGCACAAACCCAAGCAACGGCTATAAGGACAGAGTATTGTTGACAGAGGATGGTTTCAGAGATGGTGATATCTCTCTGACTATCATGGATGTCCAAAAGACAGACGAGGGATTATATCGCTGCTTAGTTCATGATGAAACAGCTAAAGGATACCCGCATGCATACATGTTGCATGTGAAAGAAAACCCCATCAATGCAGGAGGAAACCAAACAGAGGGCAACACCAATGAAAAACGAATTCGGATTGGACTGATCTTTACTCTCTTGCTCATCATTCCCTTTTTTGTCTTTCTTTTATGCTGTAAGAAGACGACAACACCCGTAGCAGAAAGTCAGTCAACTACAGACAGTGAGCCTATACAGGAGAGTGACCAAAAGCAGTCAACTCGGCCTTTTTATTCTGGAGGCAACACTCACATACAGAACATGATGGTTGTGTTGGACGTGATATGCTGTTTGGAAAGGTACCCCATGACTAAAGAGGCTCTAGTGGAAACCAGGCTTGGAAAGTTGATCAATGATGTGAGAAAAAGAAGCACTGACAAAGATCTTGTTAAACGTTTAAAAAATCTCGTACGGAGTTGGCAGAGCCTGGTTGGAGTAAATGAAGCCGCGACAAAAGGGCTCTCAAGCTCTGTGGATTCAATTCCCGCTGAACGTATTCCTGTATCAGCACAAACCCTCACGGAAAATTACAGCAGAACTCTTTTCCACAATAACATGAGCCAGAGGGATGAAATGTCTCAGGGTTCTGTACCAGGCAAAAACATTTTTAGAAAGAGTAAAATACCCATCCGTGCCATCAGACCATATTCCTCGTCCATCAAGAATTTACAACAGTTCACGAGCTTGAGACCATCTCTGTCCAATCAGCATTCCCAAGAGCAGCACAAGTCCCAAAGACATGACACCTCAGTCGGTCGCAGTGACACAAAGCACCTTATGGTGGCCGAGGAACCGCCACAATCCACCTGCGTTACTTCTAGTCTACCTTTAAATTCCTCCATCCAAGATTCATACGTAAAGATGCAGCAGCCTTCAGACCTCCTCAACATACTCAAACCTGCTACGCTGAACGTTAACCTCCATGAGGTCTCCAGCACAGTGACAGACATGAGGACTTATGAGGACACGAAGAATCAGCATAACAATCACACTGTCAAACTCGACGGACGTCCTGCAGAGGACAATACCAAAACTACACAACAGCAAGCAGGCAAACTAACATATGACCCTCATACTCGACAAATCAAACCTATATTAAGCAAAACATCTGATTGTCAGAGATCAACAGGAAGTGAAATCCAAGGCAGTGAGCGTCTGAAACAAAACCTTTGCTTGGTCCAACAGACAAACTGGAGGGAGATGTCACAATATAAGATGATTCAGAATAGCTTGCCAACTTCAGAAAGATCAAGAATGGACTTTTCTGTGGCTGAGAAATTCAAGCAAGAGAAAAATTTAAAAGTCTACAGAAAAGCACATGCGTTTATACCAGATTTCCCTGTCACAGACCTTCCTGGGGTCAGCCGAGAGATCACGGAGCGAGACCTGGTCAGGATACGCAGTCATCGATGGCATGGTGTGAATGGCTGCTATGATAATAGAAATAACTGGTACGACTGGACTCAGTCCATAACCCTGGATCCATATGGGGATGGGAGTAAACTTAAGATCTTGCCTTATGTTGCCATAGATTACAGACTTTGAGACTGTAAAGGCGTGTTTCTTAAAAGTGGATACACAACTATTTTAGACCTTGTTGTGCTTCTCAATTCTTTGTGATTAGTACTATGAAACCTCTGTCCTGACTTTTAACAATGTACCAATGACATGATACATTTTTAAAATATTATATGCATCTAGATTATTTAGAGCATTGTTTTCAGTATAGGAAACAGACAA

Function

NR:

description
CRSP70

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_03652858_03668897.mRNA True 2326 mRNA 0.42 5 3652806 3669092

Neighbor

gene id symbol gene type direction distance location
CI01000057_03636623_03639946 NA coding upstream 12677 3636623 ~ 3640129 (+)
CI01000057_03611693_03627832 CSE1L coding upstream 24392 3611693 ~ 3628414 (+)
CI01000057_03496993_03600733 PTPRG, PTPRGA coding upstream 52073 3496993 ~ 3600733 (+)
CI01000057_03326630_03330891 NA coding upstream 321717 3324719 ~ 3331089 (+)
CI01000057_02884788_02888727 NA coding upstream 764001 2884081 ~ 2888805 (+)
CI01000057_03669937_03677055 SLC35E1 coding downstream 318 3669410 ~ 3677881 (+)
CI01000057_03692584_03701758 NA coding downstream 23492 3692584 ~ 3702032 (+)
CI01000057_03709399_03714556 NA coding downstream 39852 3708944 ~ 3714559 (+)
CI01000057_03719251_03750681 NA coding downstream 50159 3719251 ~ 3750801 (+)
CI01000057_03752329_03758938 R3HDM4 coding downstream 82312 3751404 ~ 3759109 (+)
G245360 NA non-coding upstream 300210 3337261 ~ 3352596 (+)
G245389 NA non-coding upstream 325636 3326786 ~ 3327170 (+)
G245199 NA non-coding upstream 568435 3013131 ~ 3084371 (+)
G245200 NA non-coding upstream 611752 3018556 ~ 3041054 (+)
G245196 NA non-coding upstream 644882 3007677 ~ 3007924 (+)
G245428 NA non-coding downstream 14062 3683154 ~ 3683354 (+)
G245358 NA non-coding downstream 37265 3706357 ~ 3706854 (+)
G245349 NA non-coding downstream 38736 3707828 ~ 3708448 (+)
G245430 NA non-coding downstream 95219 3764311 ~ 3764625 (+)
G245357 NA non-coding downstream 146541 3815633 ~ 3816359 (+)
G245401 NA other upstream 114364 3537569 ~ 3538442 (+)
G245231 NA other upstream 360244 3087096 ~ 3292562 (+)
G243991 NA other upstream 1000246 2635237 ~ 2652560 (+)
G243975 NA other upstream 1075954 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 1256324 2394598 ~ 2396561 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 172936 3842028 ~ 3844691 (+)
G245486 NA other downstream 540805 4209897 ~ 4212081 (+)
G245725 NA other downstream 1429593 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 1904812 5564489 ~ 5579843 (+)
G245856 NA other downstream 1968562 5637654 ~ 5643340 (+)

Expression


Co-expression Network