G245389


Basic Information

Item Value
gene id G245389
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 3326786 ~ 3327170 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU278554
CGTGTGTGTTTTTGTGACATATCAGGACACAAATTTGTATAATGATATAGGTATTACAAGGAGAGGGTGACTTATGAGGACATTACCCCATGTCCCCATTTTTCAAAAGGCTTATAAATCATACAGAATGAGTTTTTGTGAGAAAGTAAAAATGTGCACAGTTTCCTGTGATGGGTAGGTTTAGGGGTAGGGGTGTAGGGCGATAGAAAATACGGTTTGTACAGTATAAAAACCAGTACGCCTATGGAATGTCCCCGCAATTCACAAAAACAAACGTGTGTGTGTGTGTGTGTGTGGTTCAGGTATTCAAAAATGTCTCCACAAGGATTACAACATCTGAAATCCTTGTCTTTATGGGGACATTTTTTGGTCCCCATGAGGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278554 True 385 lncRNA 0.39 1 3326786 3327170

Neighbor

gene id symbol gene type direction distance location
CI01000057_02884788_02888727 NA coding upstream 437981 2884081 ~ 2888805 (+)
CI01000057_02794112_02799150 NA coding upstream 527633 2793991 ~ 2799153 (+)
CI01000057_02758170_02782493 CAMK1A, CAMK1.L, CAMK1B, CAMK1 coding upstream 544220 2758170 ~ 2782566 (+)
CI01000057_02707814_02708251 NA coding upstream 618412 2707814 ~ 2708374 (+)
CI01000057_02693930_02700711 GNL3 coding upstream 626075 2693930 ~ 2700711 (+)
CI01000057_03496993_03600733 PTPRG, PTPRGA coding downstream 169823 3496993 ~ 3600733 (+)
CI01000057_03611693_03627832 CSE1L coding downstream 284523 3611693 ~ 3628414 (+)
CI01000057_03636623_03639946 NA coding downstream 309453 3636623 ~ 3640129 (+)
CI01000057_03652858_03668897 NA coding downstream 325636 3652806 ~ 3669092 (+)
CI01000057_03669937_03677055 SLC35E1 coding downstream 342240 3669410 ~ 3677881 (+)
G245199 NA non-coding upstream 242415 3013131 ~ 3084371 (+)
G245200 NA non-coding upstream 285732 3018556 ~ 3041054 (+)
G245196 NA non-coding upstream 318862 3007677 ~ 3007924 (+)
G245195 NA non-coding upstream 321776 3004792 ~ 3005010 (+)
G245189 NA non-coding upstream 341978 2984589 ~ 2984808 (+)
G245360 NA non-coding downstream 10091 3337261 ~ 3352596 (+)
G245428 NA non-coding downstream 355984 3683154 ~ 3683354 (+)
G245358 NA non-coding downstream 379187 3706357 ~ 3706854 (+)
G245349 NA non-coding downstream 380658 3707828 ~ 3708448 (+)
G245430 NA non-coding downstream 437141 3764311 ~ 3764625 (+)
G245231 NA other upstream 34224 3087096 ~ 3292562 (+)
G243991 NA other upstream 674226 2635237 ~ 2652560 (+)
G243975 NA other upstream 749934 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 930304 2394598 ~ 2396561 (+)
G243558 NA other upstream 2368415 956063 ~ 958371 (+)
G245401 NA other downstream 210399 3537569 ~ 3538442 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 514858 3842028 ~ 3844691 (+)
G245486 NA other downstream 882727 4209897 ~ 4212081 (+)
G245725 NA other downstream 1771515 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 2246734 5564489 ~ 5579843 (+)

Expression


Co-expression Network