CI01000057_02884788_02888727


Basic Information

Item Value
gene id CI01000057_02884788_02888727
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 2884081 ~ 2888805 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000057_02884788_02888727.mRNA
ATATAAATGCAGGTGTCAGTATAGTAAATAGTAAAAGCTGTACAGAACAAGATTAAGCACTTAGAAGAGTGAGAAATACGGTGAATACATTCTATTTTAAAGGCCTGATTGAATTTGTACAGCCATACTGCCTAATTACCACAAGACTGACTCTCTGACCCCTCAGTATTTTATATAACTATATAACTAAGTTTCATATAACAGCTTTCTACACCATTGGCATTTTCTGTCTGCTCTCTCTTTGGCTGTTTTTTCTTGCAGATAACAGTTATTCTGCTCTTCTGCCAGCGCTGCTGCCAGTCTGTTTGCTTACTTTAAAATGAATAGAAACAACTTAATGGACTTTGTGGCAAGACTGCACAAAACAGTGATGCAGTATGCCATTAAAACCAGCCGCAACTCCAAACAAATGAAGATTCACAATGATTGAGGAGTCATTGGATTGTTCCAGAAATCACAATGTTTTCTTTAATGATCTTTTATTTTGCCTCTTTTTCCATGTGGCTTACTTTTTTGAGATAACTTAAAAAGCAGTATTTACATCAAAAATCTTCTTTTTAAATACATACATTGTAGCCTTTCTGCTGACCTGCAGTTCATTACTAATAACTTGTGATTTATGATGTAGATAAGGACAACTGTAGAACAACATCTACACATACTGGCACAAAGATGATGGTTAAGTGGTTATTCTCATCAGATCAGCGATGTACGTGGTAGGGAGTAATGAGGCTGGGTGGTGCTGGGAGAATGGACAGGGGCGCTGGGCTCAGATAATCAACAGTCCCTCTCGTCTGATTTTGGCCTGCTCTCTAAATTATGGATCAGTGCGCGTTCCTCTTGCCTCGTCAGAAGCACCGGGAACCAGTGGGCTACCACAGCTAGCTCATCAGAGAAAGTTGTGGCAGGAGTTCGATTTTCTCATTGCACCAGGGGAGAGAGATTACACCATACAGTCCCTGAATTTGATATACTGCATTTGTTCCCATTTCGGTGACACTCCCACAGTGCCAGACTAACAACAAAAAAACAACGACATGCTTATTTATTTATATATCATTATGTGGACAGAAATCCAAAAATCGGAGAGCACATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000057_02884788_02888727.mRNA True 1097 mRNA 0.39 4 2884081 2888805

Neighbor

gene id symbol gene type direction distance location
CI01000057_02794112_02799150 NA coding upstream 84928 2793991 ~ 2799153 (+)
CI01000057_02758170_02782493 CAMK1A, CAMK1.L, CAMK1B, CAMK1 coding upstream 101515 2758170 ~ 2782566 (+)
CI01000057_02707814_02708251 NA coding upstream 175707 2707814 ~ 2708374 (+)
CI01000057_02693930_02700711 GNL3 coding upstream 183370 2693930 ~ 2700711 (+)
CI01000057_02618561_02619733 GATA2A, GATA2 coding upstream 264310 2618420 ~ 2619771 (+)
CI01000057_03326630_03330891 NA coding downstream 435914 3324719 ~ 3331089 (+)
CI01000057_03496993_03600733 PTPRG, PTPRGA coding downstream 608188 3496993 ~ 3600733 (+)
CI01000057_03611693_03627832 CSE1L coding downstream 722888 3611693 ~ 3628414 (+)
CI01000057_03636623_03639946 NA coding downstream 747818 3636623 ~ 3640129 (+)
CI01000057_03652858_03668897 NA coding downstream 764001 3652806 ~ 3669092 (+)
G245107 NA non-coding upstream 369 2883474 ~ 2883712 (+)
G245103 NA non-coding upstream 7357 2876485 ~ 2876724 (+)
G244070 NA non-coding upstream 47732 2836080 ~ 2836349 (+)
G244069 NA non-coding upstream 48029 2835808 ~ 2836052 (+)
G244068 NA non-coding upstream 50781 2831350 ~ 2833300 (+)
G245145 NA non-coding downstream 36214 2925019 ~ 2925254 (+)
G245151 NA non-coding downstream 40200 2929005 ~ 2931066 (+)
G245189 NA non-coding downstream 95784 2984589 ~ 2984808 (+)
G245195 NA non-coding downstream 115987 3004792 ~ 3005010 (+)
G245196 NA non-coding downstream 118872 3007677 ~ 3007924 (+)
G243991 NA other upstream 231521 2635237 ~ 2652560 (+)
G243975 NA other upstream 307229 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 487599 2394598 ~ 2396561 (+)
G243558 NA other upstream 1925710 956063 ~ 958371 (+)
G243557 NA other upstream 1928886 954843 ~ 955195 (+)
G245231 NA other downstream 198291 3087096 ~ 3292562 (+)
G245401 NA other downstream 648764 3537569 ~ 3538442 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 other downstream 953223 3842028 ~ 3844691 (+)
G245486 NA other downstream 1321092 4209897 ~ 4212081 (+)
G245725 NA other downstream 2209880 5098685 ~ 5103606 (+)

Expression


Co-expression Network