G245357


Basic Information

Item Value
gene id G245357
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 3815633 ~ 3816359 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU278522
CTCAGTATCCCTTTCTTATGTGAGTGCTTTTGAGTTTTGGCTTGCTTAGTTTGAATCTGAAATTGCTCCTCGGAGAGACCAGCTTTTGGTTACGGTGCTGAACGTACCACTGATGCACCAGTCTGTGTATTTCCACTTGTGCGTTTTTAAAACGTTTGAATTGCGTGTCGACCTCTTGACTGCTTCTATTAGGGGTGAAGGACAAAGACAATCCTAACCCATTTAATCTATCTATTGATATGTAACTGGGGGAAAGGGGAACCAAAGAATGTCACATAAGTGCTGTTTTGGCCAGAATATTATGGATTGAAAATACTCTATAACCTAGAAAATCATCACACAACAACTGTACCTCTCTCAGTCTGAATACTGAAAACCCGGATAATGACAAAAAAAAGGACCTCAACACATATTCAAAACAAAATGCAGTTAACAGATGAAATTGAATTTTTCTTTTTTAACTGAAGTTATTTGCCTTTTTTTATATGTTGTAATGTAATGGTAATTCTGGCGCTTCAGTTTGGGTGTGTCTGTTTTTTTGTTGTTCAGTACGTTATTGCCCTGTTTAAAAGAGAAAGTTCATGTTGATGAGTTTTGTTGTTTCAGAGTTTGCAAAATGTACTCTCAACGTTTACATTTTATAATTGTCAAGCATCAGATTTTTCAATGTTTGATTTTTTCAAAATTGAGATCTTCAGCTGTTAACATAGACGTTGAATACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU278522 True 727 lncRNA 0.35 1 3815633 3816359

Neighbor

gene id symbol gene type direction distance location
CI01000057_03790271_03807327 ARID3A coding upstream 8306 3790189 ~ 3807327 (+)
CI01000057_03752329_03758938 R3HDM4 coding upstream 56524 3751404 ~ 3759109 (+)
CI01000057_03719251_03750681 NA coding upstream 64832 3719251 ~ 3750801 (+)
CI01000057_03709399_03714556 NA coding upstream 101074 3708944 ~ 3714559 (+)
CI01000057_03692584_03701758 NA coding upstream 113601 3692584 ~ 3702032 (+)
CI01000057_03817584_03827165 CTDSPL3 coding downstream 667 3817026 ~ 3827165 (+)
CI01000057_03842028_03844033 NDUFS7.S, MGC85267, NDUFS7 coding downstream 25669 3842028 ~ 3844691 (+)
CI01000057_03857470_03880767 DAZAP1 coding downstream 41111 3857470 ~ 3880879 (+)
CI01000057_03943917_03961522 GTPBP3 coding downstream 127558 3943917 ~ 3961537 (+)
CI01000057_03973241_03985010 USHBP1 coding downstream 156882 3973241 ~ 3985057 (+)
G245430 NA non-coding upstream 51008 3764311 ~ 3764625 (+)
G245349 NA non-coding upstream 107185 3707828 ~ 3708448 (+)
G245358 NA non-coding upstream 108779 3706357 ~ 3706854 (+)
G245428 NA non-coding upstream 132279 3683154 ~ 3683354 (+)
G245360 NA non-coding upstream 463037 3337261 ~ 3352596 (+)
G245341 NA non-coding downstream 30944 3847303 ~ 3848415 (+)
G245346 NA non-coding downstream 32812 3849171 ~ 3851942 (+)
G245439 NA non-coding downstream 81965 3898324 ~ 3898641 (+)
G245359 NA non-coding downstream 83161 3899520 ~ 3907602 (+)
G245441 NA non-coding downstream 95232 3911591 ~ 3918597 (+)
G245401 NA other upstream 277191 3537569 ~ 3538442 (+)
G245231 NA other upstream 523071 3087096 ~ 3292562 (+)
G243991 NA other upstream 1163073 2635237 ~ 2652560 (+)
G243975 NA other upstream 1238781 2576453 ~ 2576852 (+)
CI01000057_02395285_02396439 NA other upstream 1419151 2394598 ~ 2396561 (+)
G245486 NA other downstream 393538 4209897 ~ 4212081 (+)
G245725 NA other downstream 1282326 5098685 ~ 5103606 (+)
CI01000057_05564489_05579041 NA other downstream 1757545 5564489 ~ 5579843 (+)
G245856 NA other downstream 1821295 5637654 ~ 5643340 (+)

Expression


Co-expression Network