XLOC_001262 (si:ch211-202n12.2)


Basic Information

Item Value
gene id XLOC_001262
gene name si:ch211-202n12.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 26538446 ~ 26544268 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002056
AGAGTGACAAACGAACAACTACAGTGAACAGTGATTTAACGACTTTAGCGACTTGTTTTGCATCTCACATGGCAAATAACATGTCAGCTGTGTTTTTTACTCGAGTTAATTTGATTAAGCCTGTATTTGTCAACGATAATCATCAAAGTGACACAATGGCTTCTCCTACACCTCCAACCATGATGAGAAGCCCAACAGGAAATCCAGAGAAAAGGAGGAAAGTAAATAATGCCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGTAAAGCGCCCTTTCCTTTGCTGTGACTGGAACAGAGTGGTTTCCTTTGAACCACAGTCGGATATGGATGATTTCGAGCATCTGCCTGTTCCAGGTCCCTCCAGGACCGTCACAGCACATGCGGACCCTGAGCCGGTGTGGCTGCCAGGCCAGATCTGTGAAGAACCTCAGCCgttgagtgttccgggcccctCCAGCATCAAGCAAACAGCAGATCTGGCCCGTCCTGAGTCCCCAACAGCCCTGACAGGTTATGTTGATACTGAGCTGGAGTGTCTACCAGGCCAGATCTGGGAAGATCCTCAGCCAATCAGTGTCCATGGCCTCACCAATATTAAGAACATGACGGATGCAGATTCGGCCTGTCCTGAGTCGCCTTCGTCTGTTCAACACAACTCTAAAATGGATGGGACTGATGaaaaacccaagaaaggaaggaaagggaAAAGAGTCTCTGCTTTCTTCAAGAGAGTATGGAAGGCTGCAACGCGCCCTTTCCTGTGCTGTGACACAGATATAGTCCAGCAATTTACACCACAACCTGAACCTGAGCCAGAGCCAGAGTCAGAGCCTGAGCCAGAGCTGGAGCAAGCGTACCCTGAGGCAGTATGTCTGCCAGGCCAGGTTCCTGAAGAGTCTAAAGAGGCTTCTGGACCCACTCGTGgattTGATTTGTCTGATTTTGAAGTAGGAGCCGTGATTGGAGAAGGAGCTTTTGGCCAGGTGTTTGTGGCATCTCACAAACTTCGTAAAAGTGAAAAGGTTGCCCTGAAGTTTATCAACAAGAATGAAGACAACCGTTATCTTGACATTgatgGTCATTCCACACCTGTGCTTGCGGAAGTGGCAATGATGCTTAAGTTGATGAATGCTCCGCAATGTCCAAACATCATCGAATTACACGACTGGATTGAGAATGAGAAAAACTTCATTCTCAGTCTGGAGTACGCAGAGTCATGCCAGACCTTGGATCAGTACATCAAAGATACATTGGACATTGGTGAAAAGCGAGCACGCCAGTTAATGCGTCAGTTGATTCAAGCTGTAAAGTTCTGCACTGAGCGTGGAGTTTTCCATGGAGATATCCACACGGAGAACATCCTGGTGACTCAACCCCGATTAGAGCTCAAATTGATCGACTTTGGTTGTGCTCAGCCAATTACCCACAAGCCTTTCAATAGCGATCAATATCTAGGAGTTATTTTCTGCACGCCACCTGAGGTTTTTAGGGATCCCACATTCTATGCTGACCCGGTAAACATCTGGACAATTGGCATTGTGCTGTATGAAATCTTGCATGCAGAATTGCCCTTTCGTGACGAAGATTCAGTAATGTTTGAATCCGCTGAGATACACCCCAGGTTATCTACAGCATGCCAGGACCTGATTTCCCAGTGTTTCATCCGATGTCCACTTCAGCGGCTGCAGTTACATCAGTTAGAAAAGCACCAGTGGTTCAATCTAACGACCCCAAATCTTATGGAGCTGTTAGACGCCAGGATaaaacaCTAAAGAAGCGAGAAAGAGGAGAGCAGCATTTCCAGAAATTTCACAAGACTATTAAAGTTATTAATtactccctcatgtcattccaaacccctaaGACCTTACTTTTCTTCAGTGTCAGTTCATGACGTGTGTTGATGAGAGCTCTGTCCTGCACTGTATGtgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaacgtcagcagtgcgacacacatacagtgcactgGTCTCTTCTGAACATGCGGtttgagggtcagagagctctcagatttcatctcaaatgttttaatttgtgttctcAATATGAACTAAACATGAATATGAACTAAGGACATGAgctgagtaattaatgacaataatggtAATGAATGGTTCCtagaccgcagctctgcacaagacctttggccacaggagaaatggtcgtgcccaaccgagactggtttctctcgaggtttttttccttcacttttgtcaaatggtgaagttttgttcctcgccactgtcgccgctggcttgcttggttgggacttgtggagctgcgcatcgatggatttgctcttcagtgtttggactttcagcagtgacaattaaactacactgaactgaactgaacttcaactgtgaaaactggactgacacagttttaatttacttctatgttaagctgctttgacacaatccacattgtaaaagcgctatagaaatgaagatgaattgaactgaattaatgatgaaaCTCCATCAGGAAATCCAGTGCTGTCAGTTTTCTCCTCTAAAGTGTCATCAAAGATCTGCTCAACTATTTTCTACCTCATAAATGAATCTGGTGTTCTGTCATAAGAGAGActgattgttttataattaagTTTTCATGATTGTTTTGTAATTAATTGTTCTTTGAATTGTGTTGTGATGAATTGcttttatatattgttaataattccAATAAAATCCTGTGAATCAAA
>TCONS_00002057
AGCTGTTAGACGCCAGGATGTAGAGGAACACACTGAGCACAAAAaaaacaCTAAAGAAGCGAGAAAGAGGAGAGCAGCATTTCCAGAAATTTCACAAGACTATTAAAGTTATTAATtactccctcatgtcattccaaacccctaaGACCTTACTTTTCTTCAGTGTCAGTTCATGACGTGTGTTGATGAGAGCTCTGTCCTGCACTGTATGtgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaacgtcagcagtgcgacacacatacagtgcactgGTCTCTTCTGAACATGCGGtttgagggtcagagagctctcagatttcatctcaaatgttttaatttgtgttctcAATATGAACTAAACATGAATATGAACTAAGGACATGAgctgagtaattaatgacaataatggtAATGAATGGTTCCtagaccgcagctctgcacaagacctttggccacaggagaaatggtcgtgcccaaccgagactggtttctctcga

Function

symbol description
si:ch211-202n12.2 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096665

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002056 False 2756 mRNA 0.44 10 26538446 26544268
TCONS_00002057 True 520 processed_transcript 0.43 2 26538961 26539624

Neighbor

gene id symbol gene type direction distance location
XLOC_001261 ints12 coding downstream 94371 26438597 ~ 26444075 (-)
XLOC_001260 ppa2 coding downstream 140085 26389153 ~ 26398361 (-)
XLOC_001259 CU570873.1 coding downstream 187805 26350526 ~ 26350641 (-)
XLOC_001258 cxxc4 coding downstream 243451 26250729 ~ 26294995 (-)
XLOC_001257 NA coding downstream 290159 26243505 ~ 26248287 (-)
XLOC_001263 NA coding upstream 10612 26554880 ~ 26595059 (-)
XLOC_001264 NA coding upstream 29161 26573429 ~ 26575260 (-)
XLOC_001265 anp32b coding upstream 116101 26660369 ~ 26664840 (-)
XLOC_001266 NA coding upstream 121490 26665758 ~ 26669757 (-)
XLOC_001267 trmo coding upstream 126560 26670828 ~ 26676391 (-)
XLOC_001256 NA non-coding downstream 352726 26183399 ~ 26185720 (-)
XLOC_001247 CU929073.1 non-coding downstream 674807 25862966 ~ 25863639 (-)
XLOC_001245 NA non-coding downstream 823952 25709312 ~ 25714494 (-)
XLOC_001271 NA non-coding upstream 474398 27018666 ~ 27024844 (-)
XLOC_001274 NA non-coding upstream 1200530 27744798 ~ 27750558 (-)

Expression


Co-expression Network