G427750


Basic Information

Item Value
gene id G427750
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 15573669 ~ 15573988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU491156
TCACAATAGAATATAGATAACATATCAAATGTTGAAAGTGAGACATTTTGAAATGTCATGCCAAATATTGGCTCATTTTGGATTTCATGAGAGCTACACATTCCAAAAAAGTTGGGACAGGTAGCAATAAGAGGCCGGAAAAGTTAAATGTACATACAAGGAACAGCTGGAGGACCAATTTGCAACTTATTAGGTCAATTGGCAACATGATTGTGTATAAAAAGAGCCTCTCAGAGTGGCAGTGTCTCTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGCGGCGAAAAATAGTGGAGCAATATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU491156 True 320 lncRNA 0.40 1 15573669 15573988

Neighbor

gene id symbol gene type direction distance location
CI01000304_15500233_15509862 WNT11, WNT11.L, WNT11R coding upstream 62953 15500233 ~ 15510716 (+)
CI01000304_15483378_15486113 NA coding upstream 87283 15483378 ~ 15486386 (+)
CI01000304_15472687_15483327 NA coding upstream 90342 15472687 ~ 15483327 (+)
CI01000304_15467093_15471138 PRKRIRA coding upstream 102187 15467093 ~ 15471482 (+)
CI01000304_15462162_15465511 NA coding upstream 108158 15462162 ~ 15465511 (+)
CI01000304_15723867_15741978 NA coding downstream 149879 15723867 ~ 15742863 (+)
CI01000304_15776859_15777750 ZBTB21 coding downstream 202871 15776859 ~ 15777768 (+)
CI01000304_15779082_15779951 ZBTB21 coding downstream 205094 15779082 ~ 15780105 (+)
CI01000304_15785399_15786785 RAD51C coding downstream 211411 15785399 ~ 15787028 (+)
CI01000304_15817532_15846675 PPM1E coding downstream 241788 15814649 ~ 15846892 (+)
G427749 NA non-coding upstream 4754 15568685 ~ 15568915 (+)
G427748 NA non-coding upstream 5366 15568094 ~ 15568303 (+)
G427746 NA non-coding upstream 6338 15567103 ~ 15567331 (+)
G427739 NA non-coding upstream 22473 15550961 ~ 15551196 (+)
G427737 NA non-coding upstream 30358 15543017 ~ 15543311 (+)
G427752 NA non-coding downstream 960 15574948 ~ 15575218 (+)
G427776 NA non-coding downstream 48316 15622304 ~ 15703535 (+)
G427808 NA non-coding downstream 81427 15655415 ~ 15667870 (+)
G427811 NA non-coding downstream 84530 15658518 ~ 15659058 (+)
G427777 NA non-coding downstream 131330 15705318 ~ 15707397 (+)
G426828 NA other upstream 623077 14948890 ~ 14950592 (+)
G426312 NA other upstream 1242783 14330048 ~ 14330886 (+)
CI01000304_13578347_13595075 NA other upstream 1994822 13578049 ~ 13595097 (+)
G425718 NA other upstream 3134583 12436554 ~ 12436605 (+)
CI01000304_10555326_10571933 NA other upstream 5017965 10555216 ~ 10572164 (+)
G427860 NA other downstream 311466 15885454 ~ 15889591 (+)
G428017 NA other downstream 509242 16083230 ~ 16083714 (+)
CI01000304_16505174_16506124 NA other downstream 930874 16504764 ~ 16513625 (+)
CI01000304_16761621_16764983 EXOSC8 other downstream 1181958 16761372 ~ 16765057 (+)
CI01000304_17009769_17023302 ZDHHC20, ZDHHC20A other downstream 1436742 17009769 ~ 17023882 (+)

Expression


Co-expression Network