Gene
RNA
| Item | Value |
|---|---|
| gene id | G427811 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000304 |
| NCBI id | null |
| chromosome length | 18613800 |
| location | 15658518 ~ 15659058 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU491239 | True | 505 | lncRNA | 0.42 | 2 | 15658518 | 15659058 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000304_15500233_15509862 | WNT11, WNT11.L, WNT11R | coding | upstream | 147802 | 15500233 ~ 15510716 (+) |
| CI01000304_15483378_15486113 | NA | coding | upstream | 172132 | 15483378 ~ 15486386 (+) |
| CI01000304_15472687_15483327 | NA | coding | upstream | 175191 | 15472687 ~ 15483327 (+) |
| CI01000304_15467093_15471138 | PRKRIRA | coding | upstream | 187036 | 15467093 ~ 15471482 (+) |
| CI01000304_15462162_15465511 | NA | coding | upstream | 193007 | 15462162 ~ 15465511 (+) |
| CI01000304_15723867_15741978 | NA | coding | downstream | 64809 | 15723867 ~ 15742863 (+) |
| CI01000304_15776859_15777750 | ZBTB21 | coding | downstream | 117801 | 15776859 ~ 15777768 (+) |
| CI01000304_15779082_15779951 | ZBTB21 | coding | downstream | 120024 | 15779082 ~ 15780105 (+) |
| CI01000304_15785399_15786785 | RAD51C | coding | downstream | 126341 | 15785399 ~ 15787028 (+) |
| CI01000304_15817532_15846675 | PPM1E | coding | downstream | 156718 | 15814649 ~ 15846892 (+) |
| G427752 | NA | non-coding | upstream | 83300 | 15574948 ~ 15575218 (+) |
| G427750 | NA | non-coding | upstream | 84530 | 15573669 ~ 15573988 (+) |
| G427749 | NA | non-coding | upstream | 89603 | 15568685 ~ 15568915 (+) |
| G427748 | NA | non-coding | upstream | 90215 | 15568094 ~ 15568303 (+) |
| G427746 | NA | non-coding | upstream | 91187 | 15567103 ~ 15567331 (+) |
| G427777 | NA | non-coding | downstream | 46260 | 15705318 ~ 15707397 (+) |
| G427843 | NA | non-coding | downstream | 54851 | 15713909 ~ 15714336 (+) |
| G427844 | NA | non-coding | downstream | 55784 | 15714842 ~ 15715121 (+) |
| G427906 | NA | non-coding | downstream | 81200 | 15740258 ~ 15741104 (+) |
| G427915 | NA | non-coding | downstream | 150145 | 15809203 ~ 15812033 (+) |
| G426828 | NA | other | upstream | 707926 | 14948890 ~ 14950592 (+) |
| G426312 | NA | other | upstream | 1327632 | 14330048 ~ 14330886 (+) |
| CI01000304_13578347_13595075 | NA | other | upstream | 2079671 | 13578049 ~ 13595097 (+) |
| G425718 | NA | other | upstream | 3219432 | 12436554 ~ 12436605 (+) |
| CI01000304_10555326_10571933 | NA | other | upstream | 5102814 | 10555216 ~ 10572164 (+) |
| G427860 | NA | other | downstream | 226396 | 15885454 ~ 15889591 (+) |
| G428017 | NA | other | downstream | 424172 | 16083230 ~ 16083714 (+) |
| CI01000304_16505174_16506124 | NA | other | downstream | 845804 | 16504764 ~ 16513625 (+) |
| CI01000304_16761621_16764983 | EXOSC8 | other | downstream | 1096888 | 16761372 ~ 16765057 (+) |
| CI01000304_17009769_17023302 | ZDHHC20, ZDHHC20A | other | downstream | 1351672 | 17009769 ~ 17023882 (+) |
