XLOC_012835 (BX640463.2)


Basic Information

Item Value
gene id XLOC_012835
gene name BX640463.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 27196210 ~ 27196326 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025607
TgttgctggcagctagctctctgcaactctcacatggttgcccactgaagctaagcaggattGCACTCGGTCagcacctggatgggagaccacctGGGAAAGCTAGATTGGTGAGAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000108596

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025607 True 117 rRNA 0.55 1 27196210 27196326

Neighbor

gene id symbol gene type direction distance location
XLOC_012833 pik3c2a coding upstream 110382 27000850 ~ 27085828 (+)
XLOC_012832 NA coding upstream 197621 26997576 ~ 26998589 (+)
XLOC_012831 tspan3a coding upstream 276078 26899316 ~ 26920132 (+)
XLOC_012830 ch25hl1.2 coding upstream 299384 26895994 ~ 26896826 (+)
XLOC_012829 slc28a1 coding upstream 346141 26829086 ~ 26850069 (+)
XLOC_012836 cd81b coding downstream 122263 27318589 ~ 27336157 (+)
XLOC_012837 si:dkey-29p10.4 coding downstream 141668 27337994 ~ 27358871 (+)
XLOC_012838 tp53i11b coding downstream 243354 27439680 ~ 27570030 (+)
XLOC_012839 cd82b coding downstream 375122 27571448 ~ 27626391 (+)
XLOC_012840 tspan18b coding downstream 535959 27732285 ~ 27813164 (+)
XLOC_012828 AL935332.1 non-coding upstream 448283 26747811 ~ 26747927 (+)
XLOC_012825 NA non-coding upstream 734783 26456681 ~ 26461427 (+)
XLOC_012816 NA non-coding upstream 1696602 25477794 ~ 25499608 (+)
XLOC_012841 BX649600.1 non-coding downstream 540398 27736724 ~ 27736840 (+)
XLOC_012845 CR769777.2 non-coding downstream 1107565 28303891 ~ 28304317 (+)
XLOC_012849 CT025546.2 non-coding downstream 1978767 29175093 ~ 29175208 (+)
XLOC_012854 NA non-coding downstream 2933445 30129771 ~ 30131831 (+)
XLOC_012863 NA non-coding downstream 3876917 31073243 ~ 31075619 (+)
XLOC_012817 NA non-coding upstream 1699599 25492411 ~ 25496611 (+)

Expression


Co-expression Network