CI01000320_01176457_01181900


Basic Information

Item Value
gene id CI01000320_01176457_01181900
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 1174735 ~ 1181900 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000320_01176457_01181900.mRNA
GAGAGGAGAATGGGCAATACCCCCACTCGTGTCCCACTCCTCACCTGTCACACTTTCCAGTGCAGAAAGTGCGCATTTGACAGGCTGTTACAGATAGGGTTATTACAGAAGAGGAGAGCAGGCAAAAATGCCACTTGTGTCCCGCCACTCATCTGTCACCCTCGCACAGAGAGTACTGTGACTTTTGTTTGGCCCCTTTTAAATTCACTAATAACTGTAAAAGGAGACTTGCGACCTAATGCGATTTGTCACACCGAGCTGTTCTTTAAGGACCACATGTCTCCTGTGGTGAAGACAAAAACGATCACTATTTCTGATGTCACCAACTCCCTTCGCAGTGAAGTCACCACCAAGGACATCCCGATAGTGCACACAGAGACCAAGACCATCACCTATGAGTCTGCACAGCCTAATGCGCTGTCAGAGAAGGAGTCTGGGATGCTGTTGAGTGCTCAGACCATCACCTCAGAGACTGTGAGCACCACCACCACAACCCAGATCACTAAGACGGTGAAAGGCGGGATCTCAGAGACCCGTATCGAGAAGAGAATCGTGATCACTGGAGACACTGAGATTGACCATGATAAGGCTCTTGCTCAGGCTATAAAGGAAGCAAAGGAGCAGCACCCTGACATGTCTGTCACTAAAGTGGTGGTGCATCAGGAAACAGAGATCACCCCTGAGTAACTCCTGTATGAGACATAGGTTAGTATTCATCTGCAAAACCCGTGATTATAAGACTGGGGTCGGAAGAGAGATTAATATTATATGCATTTAATTTACTTTTTTACTTTGGAAATATTGAAGTGATCTGTATGCCAAACGACCTCTTGCAGTAATGCTTCCTCGTCGTCACTCAGCATGTTTTGTTCAGTTCTGATCTATATAGGAAGCTTAAAAAAAAATGAAATGGGCAGAGTGGAAAGTGCTGCTTGTTGAGCTGGAAGGTGCAGTTTGGTAAAGGTGGAAAACCTGAAAAATTATGATCGATTTAACTATTTAAAAAAATGCTGAAGTTAATGAAAAGTTCCTTCAAAAAAATTCATTACTGATTTTTCATTTTGCCATGCAGATGAAATCTGTTAAAAGAAGACTGCTGTGAATATAAGCAATTTAGTTACAAGATGATAAGAGACTGCAGTAAATCTGCAAAATAAGATCTGCTGCAGGCATGTACATGTTTTCAAGTTTTAAAGATCTTGTGGACGAATTGCTTAAATTCTCTGCATTCTAGTTAGAGCTTTTATTTTATTCATATGACTGACAAAAAACTACAATTCTGGATTTCTTGCTTTATTTAAAGTGCAAAAACGTCTCGGGTTATGTATGTACACTGCGTCAGTTGCTGACACTCTGGGAACACGTCCTGCGGAACCTGGTGCAGTAGCAGCTCCTGGCCGTAAATTTAGTTAGGGCAGATTCTGGGTCTTAACACTAGTTTATGATAAACATTTTTGGAAGCTTTATATTCTAATTGCTGAACATGCTGAATACAAGCAGAACACTTTTGGCAGAGGTTGCATTATTCAGCCAGAGGGTGGTGCTCTAATGTTGATTGACAGGCTTTTAGTACACACAACACACGCATAGAATTGCCTTAATGTAGCACTTATTGTCTCCGAATGTCCGAAGTTGTGGAGGAATTCCAGTGATTAAAAGAAAGTTGTCTATTCTCATAACAAACATAAAACAAACACAACAGTACTATATAAAAGCTATTCGCATGCGCACTTTTAAACAAAAGGATTTATACTTTCATTAACTTGATATGCTAGTCCACATATGAACAGATATGCCAACTAGTTACTGACCTGATGTAGACTAATATACACATAGCTGAAGCGAATTGATATCTTTCTGGTCTGGAGCGGGGTTTAAAAAAGCCCAGAAGCTTCCATGCTCAACCATTTCTGATACGGGGATCTTTTGAATTAGGTCAGTCTGAGCCACCGGCTACAGGACTGCCTAGAGCCCCTAAGAGCAGCGCTACCAGGGTAGAGCCTCAGCTAAGTCCACAGTATTACATTTTTGCCTCAGTTGTGAATGGTACCCTAATTCCGAACCGTACCATACCACTTTTTTGGGACCCTTCCATTGGGGTACCTAGCACAGTAGTCCAGTACTAATCAGATCAGAGTTTACTGCCCCAAATCGTACTGAACTGTACTGTACTCTCCTCGGTGGAAACGAGGCATTAGTAGCCAACCAGGAGATCTTAAGGGAGCGGTATACTGACGGAAGCCTACGAAGGAAAATTCTTTCACTTCAATGATTTTTTATCCAGTCTTAATAAGTTGGAGAGGCAACAAAGATTGTATTGTTAACCATGATACAGACCATTCTACTTTGTGAAAAGCCCCTCTCTAACCTTCAGTTAGCCTGAAGAATGGGATTCATAAGGAGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000320_01176457_01181900.mRNA True 2409 mRNA 0.42 6 1174735 1181900

Neighbor

gene id symbol gene type direction distance location
CI01000320_01042859_01043564 NA coding downstream 131171 1042024 ~ 1043564 (-)
CI01000320_00935826_00945755 LRP12 coding downstream 228980 934432 ~ 945755 (-)
CI01000320_00745852_00758696 SLC25A32A, SLC25A32 coding downstream 415629 745030 ~ 759106 (-)
CI01000320_00688829_00696138 NA coding downstream 478547 688688 ~ 696188 (-)
CI01000320_00586900_00592523 FAM210AA coding downstream 582212 585993 ~ 592523 (-)
CI01000320_01207179_01217428 EPB41 coding upstream 25279 1207179 ~ 1217438 (-)
CI01000320_01263151_01266426 CTGFB coding upstream 81139 1263039 ~ 1266426 (-)
CI01000320_01310476_01318751 STX12 coding upstream 128444 1310344 ~ 1318751 (-)
CI01000320_01322036_01325638 NA coding upstream 139886 1321786 ~ 1325638 (-)
CI01000320_01328278_01333798 NA coding upstream 146350 1328250 ~ 1333798 (-)
G454682 NA non-coding downstream 46088 1128325 ~ 1128647 (-)
G454680 NA non-coding downstream 49075 1124882 ~ 1125660 (-)
G454677 NA non-coding downstream 65896 1108535 ~ 1108839 (-)
G454656 NA non-coding downstream 164834 1009652 ~ 1009901 (-)
G454654 NA non-coding downstream 168543 1005965 ~ 1006192 (-)
G454707 NA non-coding upstream 180858 1362758 ~ 1387226 (-)
G454711 NA non-coding upstream 184361 1366261 ~ 1377788 (-)
G454722 NA non-coding upstream 214482 1396382 ~ 1396614 (-)
G454721 NA non-coding upstream 252940 1434840 ~ 1441993 (-)
G454733 NA non-coding upstream 260244 1442144 ~ 1442443 (-)
G454686 NA other downstream 32855 1141242 ~ 1141880 (-)
G454663 NA other downstream 118840 1051468 ~ 1055895 (-)
G454495 NA other downstream 646183 527059 ~ 528552 (-)
CI01000320_00346954_00349228 ZNF706.2.S, ZNF706.2.L, ZNF706, ZNF706.2 other downstream 824533 346199 ~ 349445 (-)
CI01000320_01338270_01341123 SH3BGRL3 other upstream 154379 1336279 ~ 1343274 (-)
CI01000320_01426753_01430603 NA other upstream 244883 1426176 ~ 1430654 (-)
G456317 NA other upstream 2461337 3643237 ~ 3648040 (-)

Expression


Co-expression Network