G454738


Basic Information

Item Value
gene id G454738
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 1457744 ~ 1462005 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU522098
TGCATTTATTGACAAAATTTCTCAGTACATTATGATAAAGAGGTCATTTATAAATTATGTGAGACACAAAAACAATGAAAATACAATTTTATATTACCTAAAATAATTATAACCTGGTTTAAAACAACCATCAGAATGCAAAACTTTTCAAAGGAGTAAAAAGATCTAATGAGTTGTTATCACTGTGTCTTTGTTGCTGGGCAACCTGACCTTGGAGTGTGCTGTAAATCAGTGCGTTGTCACCCTCTCTGCCTGACCTGTGTGCTCAAACCAGCTAACACTGAAGTGAGATGGAGAGCCATGTATCCATGCCAGCTTGCTTTAATATTAGACATAAAGAAAACTGTTCACTAAATATAGTGAACCATTCAGCATTGTTGTTGAAGCTTCATTACGCAGAATCTGATTTCACCAAATACAACATGTTCGACATCTTTGTTGATCCTGGAACAACATTCCAATCAACCAATCAGATACGAAGGACAAGTTTACAGTTTATGTCAAGTTTAGGCTTACAACCAGGGTTAGGTGCTTCAACATCAGTGTTATTCACCTATCAATTTTCTCTGATTTTAGGGATAACTTATTTGAAGGGGTAGGTTTAGGAGTAAGAATATGGTTAGGATTACATTTTCGGACAGGAAAGTTGGTCCAGGATCAACAAAATGTTTACCCAGAACATGCCTTCATTACATAATCATATTTTATGAGTAACTTGTTCATATTATAGAGTAAATATCAATAATTTGATCACATAGTATTATTATTATCATGGTGTGAAAGAGCTTGTAGCCACATTTTGCTTTTAAAATAAATTATAGAAAAAACAGTGAAAAATAATACAATAGTAATAGTAAGAAAGAAAAAGTAATGTATATTGCATTATATTATGTATAAAATTGTATGCATATAGTGTATACAAGATGTAACATAGACTACTACATACAAAGTTAGGGGTCTGAAATCATTTTTTAAAAGAAATGTATAGTTTTATTCAGCATGGGCACATTAAATTGATCTAAAGTGACAGTAAAGACATTTATAATGTTACAAAAGTTTTTAAATAAATGCTACAACTTTCTATTTATCAAAGAATCTTGAAGAAAGTGTATCATGGTTTCCACACAAAAAATTAAGCAGCACAACTGTTTTTAACATTGATAATAATAAGAAATGTTTTTTTTTTTTTTGAGCAGCAAATCAGCATATTAGAATTGAGCATTACTGTAGCTGTGCACATCTGAAATCACCGTCATCAAGAATTTTTTGTAATGTTTAATTGACAAAATGAAAAAAGAAAAAAAAAAACACTCCTGATTAGACCAGTTTAAAGAAACTATGATTTTCTCTCACAGCTTTCTCTGCAGGCTGTTGACTGTTTCTTCAGCTCTCACCTCACTGTGTCCCTACAGGATAAAGTTCATCAGAAGCTTCTGAAGCAATACCATCTTCTCTCCCTCTCTCATTAGCATCCAAAAGGTCTGACGTCTATTGCGGGGAGGGGGGCCAAGAGAGAGGGAGAGGGGAACAATTACTGTCCCTCCAGTCTTTTTTATCCTTTTCAAAGGGCAGGGTGATTAGGAGAGGAAAGTTTAGATTTCCTGAACTTGAAGTGGAAACGCAGCAGTGACAGACGCATCTCAAGACTCAATCCACATCTGGTTGAGAGCGGGGGGAGTGTGTCTGTGTGGACGGCAGTACTGTAAACCCACTCAATCTAGTGTCCCTCCACATACACATGCACCGTCCTCCACCGCTTCAGTCTGTCTTCTGTTATAAAACCACTTCAAATGCAATGACAGCTGTGCTGAAAAAACCCAAATCCACCCAGTTTCAAACTGGGTTGTGATAAACTTAAATAAACCAAAATTGCACGTATACTTATAAACTGAAATTGAATTCAAAATGGCTGACGTAATTACTGGCATATCAAGAAAACTGCTCAAGAAAAATACAAGTTTTCAAGGAAATACTGCAAAAAAAAAAATTCAGCAAATCTAACATTCAGGCTAAATTATGATTAAGTAATGATTATCAATCAACATAGTACTTAACCATAAAACATAACAGGTAATTTTGGAGCTTGACTGTCTCCACAAAACAGCAGAATATTTATGTTTGCACAGACAAAATTTATGAGTGTATTATGACACAATGGACAGCAACAACCACAACTTTTGATTAAACACCATGTTGGTGTGTATGTTTGTGTGTGTCTAGTCTTAAACAGTGAGACAAAAGAAAAAGAAATAAATATACTGTACTATGTAATGTATGTATACACTGTGTTTACTAATAGGTAATATAAAATACTACATCAAAAGTTTGAGAATTTTTTTAAAGAAATGAATACTTTTTTTCAGCAAGGACACGTTAAATTGATCAAAAGTGACATTTATAAAGTTACAAAAGATTTATATTTTAAATAAATGCTGTTCTTTTGAACTGTCTATTAATCAAAGACTCAAAAATAACATTATTTATTAACACAATAAAAAATGATTCAATTTTGGAGCTTTAGTCCCCACGAGGAAAACAGCTTATAAATCATACAGAATGATGTTTTTTAAAAATGTAAAAATGCAGAAAGTTTTCTGTGATGAGTTGGTTTAGGGGATAGAATATATACAGTATGAAAATCATTGTCTATGGAATGTCCCCATAAAACATGGAAATGTGTGTGTGTGTGTGTCTATGTGTGTGTCTTGTCTCTTTTATTTTCCAAAGACTGACTCATCCGACTCCCCCTGTTTACTGATTTAGGCCGGAGAGGAGAAGTGTGGAAAATATGCATCTTCTCTTATAACTGTCCTTTTGTGGAGCACCAGTCCTCTGTAATATTTCTCACCGAGGTGAGAGTGTCCTTGTGCCAGAGAGAAGCAGCATCTCTTAACCCCTACATTGCCGAGCAGAACCGCTCACACAAAACCTACATCAACATTAAAAAACTGTGTACTTTCATGTGATTACCTTTACAATCGGTCAGATTGGGAAGGAATATATAGCAACTACAGGTTCACTTATTATTATTATGTATTTTTATTTCTGCTAAAGGATGAAATTGTATTTTAATCTGCAATATGTTTAACAAAAGTTAGTTTTTATTTAAAAATAAGCTCATATGTAATATTTTTAGTCAGTAATTCTAGCCCAAACATAATAATCATGGTTGTTGAATATCAGAGGTTGAGTGAGCTTGTCATTTCCCAAAGTGTATCGAAGGAAACAAAGTATAGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTTTTTGTGATTTATGAGAACACAAATTTGTATAATGACATGGGTATTACACTGGTATTACAACGTAAACATGAAATATTAGGACAGTCCTCATATTTAATATAGCTTTAAAAACATACTAAACAATGTTTTATTAAAAATATAAAAATGCAGAATGTTTTCTGTGATGGGTAGGTTTAGGGGTAGGGGTAGTGTAGGGGGGTAGAATGTACAGTTTGTACAGTATAAAAACCATTACGCCTATGGAATGTCCTCACTTTGATAGCAAAACAAACCTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAAGAGAATGAAACAGAAGCTCAGGACAGCAGAGTGAGCTTGATGTGACTGATGACAGGCTGTTTGTTGCTCTGTAAATCAGCTGAATCTAAGCAGTGGAAAGGTGTGAGGGCCCTTCACATTTATGGCCCCTAAGAAGTGCGGACTACATCAACATCCTCTATCATCAACTCCAAGTGCGTCAGAAAGACACTGATTCACAGAGCTCTTTTAAACTTAAAACAGTCCACATCAGTGTTTACCATCTTAGATCATGTAAGAATAATATAATACGCTGTCAATTGTGAGACAATATAGGCTAAATTGGGGAGGCTTGATGGTGTTTAAAAAATACTTGATCACTAATTCTAAGTTATTGCCTCAGTGAATTAAAGCTGAATTACGGTTTTCATTGTTGTTGCATGTTTTTTTTTCCAAACATGAAGATATTAGGTTAAACATATATTTTAGATGCATTTTTATTGCAGTATAATGGTCCCACTGCATGACATATTAATTTTAAGACTATTACATACACTGTAAAAAATATTTTCATGATTTGTTATCATAACATTTTTTTCTTTTGTCAAATCAACTTAGATACTTAATGTAGTTCAGATAACATAATATTTTGAGTTTCTGTTGATTAAACTAATTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522098 True 4234 lncRNA 0.34 2 1457744 1462005

Neighbor

gene id symbol gene type direction distance location
CI01000320_01453536_01456193 ME-T, NTL, TA coding downstream 1467 1453156 ~ 1456277 (-)
CI01000320_01426753_01430603 NA coding downstream 27090 1426176 ~ 1430654 (-)
CI01000320_01394827_01394991 NA coding downstream 61645 1394798 ~ 1396099 (-)
CI01000320_01345762_01346867 NA coding downstream 110877 1345662 ~ 1346867 (-)
CI01000320_01338270_01341123 SH3BGRL3 coding downstream 114470 1336279 ~ 1343274 (-)
CI01000320_01719471_01731780 NA coding upstream 257301 1719306 ~ 1731876 (-)
CI01000320_01896359_01898516 NA coding upstream 433819 1895824 ~ 1898516 (-)
CI01000320_01914015_01916289 NA coding upstream 451299 1913304 ~ 1916289 (-)
CI01000320_01996579_02046284 NA coding upstream 534353 1996358 ~ 2046284 (-)
CI01000320_02054421_02068560 PHACTR4A coding upstream 592406 2054411 ~ 2068560 (-)
G454733 NA non-coding downstream 15301 1442144 ~ 1442443 (-)
G454721 NA non-coding downstream 15751 1434840 ~ 1441993 (-)
G454722 NA non-coding downstream 61130 1396382 ~ 1396614 (-)
G454707 NA non-coding downstream 70518 1362758 ~ 1387226 (-)
G454711 NA non-coding downstream 79956 1366261 ~ 1377788 (-)
G454760 NA non-coding upstream 60905 1522910 ~ 1523116 (-)
G454761 NA non-coding upstream 62482 1524487 ~ 1524770 (-)
G454763 NA non-coding upstream 69116 1531121 ~ 1532421 (-)
G454780 NA non-coding upstream 99657 1561662 ~ 1566311 (-)
G454787 NA non-coding upstream 106935 1568940 ~ 1570804 (-)
G454686 NA other downstream 315864 1141242 ~ 1141880 (-)
G454663 NA other downstream 401849 1051468 ~ 1055895 (-)
G454495 NA other downstream 929192 527059 ~ 528552 (-)
G456317 NA other upstream 2181232 3643237 ~ 3648040 (-)

Expression


Co-expression Network