G454780


Basic Information

Item Value
gene id G454780
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000320
NCBI id null
chromosome length 3894707
location 1561662 ~ 1566311 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU522151
GTTAAAATCCATCTTTTACTTTATGTATCTTATTATTCAAAATATTACACTTCAAAACTAATTAATTGTCAATAATTTTCATTATTGATGATTATCGATTTTCGTTTTGTTGTTGCAGCCTTGTTACAGCCCTAATTGAAAGTTAAGAACCTCAATTTACTTCATAAGGGAATAAACTACCCGTCCCATGAAACAATGCAGTTGATTAACAATTTAATCCAAGAGGACAAAGTACTGAAATATTCAAAATTAAAAGTTTAAGTTTACTGCAATATTTTTAAAAATATACCAATATTGTTACACAATGTACACGTTTACACCATTAGTTTTCAATGTTTCATAGGATTGCTACTTTTGGTGCAGTGTTTCCATGGTAACAGTGACTTCTCTGATTGGTGGATCTCTCTTGAATATTATGGGTAATGGAGTTCTACACTGAAAATACTGCAATTAAGCAGTTAAAAAAAAAAAAATATATATATATATATATATCAGCAAGTTGTAATCACACTGACTATAGGCTTTTACGGAAACATACATCATCACTTAACCTCAGAGCTCCTGGCGTGTCTTTAAACCTCTTACACATTAATCACTACAACTCAATTTATCCATGGGGAAAATGAATGGGATTTTTCCGGAACCTGACTGTTGCGCTATATGCCATGGTCACTCTCTCTAAGAGTGATTGAATGTCTGTGATTGGATTTACCAGTAAACCAATCAAAGCTGGAGCCACCGAGTCAAGGGCTGCATCCGAAAACTTAGGCAGCTGACTTGTTGCCTCGCTGCCCTATCAGGGATTGACTTTGCAGGCAGCATTTGAGCATGAAGGTATCTTACGAAACTGATTTGGACCGACTTCTGAGACAGTGTAACATTTTAATGATCTATAGCAAAACAGAGACAGTTTTGGTGATAACTAAGCAAATATTTAATTAGTACAACCATAATTTCTCACTAGAATGACATCAAAAGTGGAAAATGTTGGTCAAAAATGTACATTTACACAAACTGACCACCAACCGCAACTTTCAGATGCCATCTTTGTTTTTCAGCTCAACTTTTACAGAATGTAACACAGGATTGTGGGATATCATAGACAGCAAAGGATACATCTATACTGCCTTCAAAAATCGATCAGATGAAGGTATCTCAGGGGACAGCAAGTGAAGCTAACGTTGGATTCAGACGTGACTTGATGCCTTCCTACCTTCCTCCGAAGGCAACATTTTTAAGCTCTCGGACACAGCCAAAGTCAGATAAATACTCTCAATGTCTTTTGGTATTTCTCATAAATTTTGGTTAATAACTACACCAGATAAAATATGTTCAAAACACTATAACAACTAAGGGTTTCCATGAGTAAAAATATCCTTCAGTGACGCACTGAATAATTTTGTAAGCCAAATGTTATCACATCATATGGGCACCATCGTCAGAGCTGCAAATAAAAATATCTATTCACAGGCATCTGGACTGATCCATCGTCTCTCTCTCTCTCTCTCTCTCTTTCAAAATGAGCAAATGGCTTCTAGCTTCAAAATGACATTGCATCTGCACTATAAGCGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU522151 True 1574 lncRNA 0.36 2 1561662 1566311

Neighbor

gene id symbol gene type direction distance location
CI01000320_01453536_01456193 ME-T, NTL, TA coding downstream 105385 1453156 ~ 1456277 (-)
CI01000320_01426753_01430603 NA coding downstream 131008 1426176 ~ 1430654 (-)
CI01000320_01394827_01394991 NA coding downstream 165563 1394798 ~ 1396099 (-)
CI01000320_01345762_01346867 NA coding downstream 214795 1345662 ~ 1346867 (-)
CI01000320_01338270_01341123 SH3BGRL3 coding downstream 218388 1336279 ~ 1343274 (-)
CI01000320_01719471_01731780 NA coding upstream 152995 1719306 ~ 1731876 (-)
CI01000320_01896359_01898516 NA coding upstream 329513 1895824 ~ 1898516 (-)
CI01000320_01914015_01916289 NA coding upstream 346993 1913304 ~ 1916289 (-)
CI01000320_01996579_02046284 NA coding upstream 430047 1996358 ~ 2046284 (-)
CI01000320_02054421_02068560 PHACTR4A coding upstream 488100 2054411 ~ 2068560 (-)
G454763 NA non-coding downstream 29241 1531121 ~ 1532421 (-)
G454761 NA non-coding downstream 36892 1524487 ~ 1524770 (-)
G454760 NA non-coding downstream 38546 1522910 ~ 1523116 (-)
G454738 NA non-coding downstream 99657 1457744 ~ 1462005 (-)
G454733 NA non-coding downstream 119219 1442144 ~ 1442443 (-)
G454787 NA non-coding upstream 2629 1568940 ~ 1570804 (-)
G454758 NA non-coding upstream 19512 1585823 ~ 1586895 (-)
G454753 NA non-coding upstream 30514 1596825 ~ 1599621 (-)
G454817 NA non-coding upstream 62927 1629238 ~ 1634639 (-)
G454823 NA non-coding upstream 89636 1655947 ~ 1656149 (-)
G454686 NA other downstream 419782 1141242 ~ 1141880 (-)
G454663 NA other downstream 505767 1051468 ~ 1055895 (-)
G454495 NA other downstream 1033110 527059 ~ 528552 (-)
G456317 NA other upstream 2076926 3643237 ~ 3648040 (-)

Expression


Co-expression Network