Gene
RNA
| Item | Value |
|---|---|
| gene id | G454957 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000320 |
| NCBI id | null |
| chromosome length | 3894707 |
| location | 1883288 ~ 1883602 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU522359 | True | 315 | lncRNA | 0.57 | 1 | 1883288 | 1883602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000320_01719471_01731780 | NA | coding | downstream | 151412 | 1719306 ~ 1731876 (-) |
| CI01000320_01453536_01456193 | ME-T, NTL, TA | coding | downstream | 427011 | 1453156 ~ 1456277 (-) |
| CI01000320_01426753_01430603 | NA | coding | downstream | 452634 | 1426176 ~ 1430654 (-) |
| CI01000320_01394827_01394991 | NA | coding | downstream | 487189 | 1394798 ~ 1396099 (-) |
| CI01000320_01345762_01346867 | NA | coding | downstream | 536421 | 1345662 ~ 1346867 (-) |
| CI01000320_01896359_01898516 | NA | coding | upstream | 12222 | 1895824 ~ 1898516 (-) |
| CI01000320_01914015_01916289 | NA | coding | upstream | 29702 | 1913304 ~ 1916289 (-) |
| CI01000320_01996579_02046284 | NA | coding | upstream | 112756 | 1996358 ~ 2046284 (-) |
| CI01000320_02054421_02068560 | PHACTR4A | coding | upstream | 170809 | 2054411 ~ 2068560 (-) |
| CI01000320_02151521_02154094 | EDN2 | coding | upstream | 267640 | 2151242 ~ 2154201 (-) |
| G454942 | NA | non-coding | downstream | 14070 | 1868989 ~ 1869218 (-) |
| G454851 | NA | non-coding | downstream | 159579 | 1722972 ~ 1723709 (-) |
| G454840 | NA | non-coding | downstream | 180917 | 1702140 ~ 1702371 (-) |
| G454837 | NA | non-coding | downstream | 191547 | 1691467 ~ 1691741 (-) |
| G454830 | NA | non-coding | downstream | 194280 | 1676299 ~ 1689008 (-) |
| G454960 | NA | non-coding | upstream | 947 | 1884549 ~ 1884893 (-) |
| G454967 | NA | non-coding | upstream | 5812 | 1889414 ~ 1889931 (-) |
| G454968 | NA | non-coding | upstream | 6555 | 1890157 ~ 1890384 (-) |
| G455623 | NA | non-coding | upstream | 16000 | 1899602 ~ 1902381 (-) |
| G455624 | NA | non-coding | upstream | 19071 | 1902673 ~ 1902892 (-) |
| CI01000320_01338270_01341123 | SH3BGRL3 | other | downstream | 542072 | 1336279 ~ 1343274 (-) |
| G454686 | NA | other | downstream | 741408 | 1141242 ~ 1141880 (-) |
| G454663 | NA | other | downstream | 827393 | 1051468 ~ 1055895 (-) |
| G454495 | NA | other | downstream | 1354736 | 527059 ~ 528552 (-) |
| G456317 | NA | other | upstream | 1759635 | 3643237 ~ 3648040 (-) |
