XLOC_016319


Basic Information

Item Value
gene id XLOC_016319
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 21571136 ~ 21593060 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033809
GTGCTGTTGTTTGTGGACTCTTAATGGAACCAGAGAGCTCTGGGAGTCTCTTAGAGGAACTGGAGGAGTTCTAGGCAGTGTCAGACCTCAGACTACTACCACTTCTACCTACTCCAATAGCAGAGATCCAGGATTTGAATGGAAGGATTCATGGCCATGAGAGCTGAATGAAGCGAGTCAGCATCAGGGAATGAGACACACTTGTGTTACAGCAGTCCCATGGCAAATCATGTCAAAACAATTGATGTTGTTGATGATATGCATATTCTGGATGATGTGCAACATCAGAGGAACCTGCATTAAAACGTCTCCAAATGGCAATACCTGCAGTCATGAACTGGAAAACTGGAAGAAAGCCAGAGGGAAGAGATTTATGGTCCTAGCCCCGAGAATGTGGGAGCCGCTTTGTAgttagtatgttttttttcccccaggaGGTGCTGTATCTGTGTAAAGACGACCACACGTCTTCCATGAAAGCCACACAATTCATTCTGGCATTGTAAAAGCTTTAATTTGCATGCGCTCATTATTTACCTCTCCTGATTGCCTAATCAAAACAAAGAGCCTGAGCGAGAGAGAATATCCTGGGATGAATTATGGCCAGCTGTtcactgtgtttcaaagatattttcAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033809 True 637 lncRNA 0.44 3 21571136 21593060

Neighbor

gene id symbol gene type direction distance location
XLOC_016318 NA coding downstream 29093 21541606 ~ 21542043 (-)
XLOC_016317 plcd1b coding downstream 132644 21387902 ~ 21438492 (-)
XLOC_016316 NA coding downstream 187742 21381325 ~ 21383394 (-)
XLOC_016315 klhl40a coding downstream 219035 21326957 ~ 21352101 (-)
XLOC_016314 CU464125.1 coding downstream 250452 21312742 ~ 21320684 (-)
XLOC_016320 ralab coding upstream 15292 21608352 ~ 21618629 (-)
XLOC_016321 C2H7orf25 coding upstream 27117 21620177 ~ 21625493 (-)
XLOC_016322 chd7 coding upstream 172610 21765670 ~ 21820697 (-)
XLOC_016323 rab2a coding upstream 228623 21821683 ~ 21847935 (-)
XLOC_016324 cyp7a1 coding upstream 557074 22150134 ~ 22152797 (-)
XLOC_016313 NA non-coding downstream 362577 21195528 ~ 21208559 (-)
XLOC_016311 NA non-coding downstream 447021 21122188 ~ 21124115 (-)
XLOC_016326 NA non-coding upstream 672322 22265382 ~ 22268977 (-)
XLOC_016327 NA non-coding upstream 720691 22313751 ~ 22315063 (-)
XLOC_016328 NA non-coding upstream 747794 22340854 ~ 22348284 (-)
XLOC_016330 NA non-coding upstream 796730 22389790 ~ 22409189 (-)
XLOC_016331 BX927330.1 non-coding upstream 841370 22434430 ~ 22434546 (-)

Expression


Co-expression Network