XLOC_017516 (aig1)


Basic Information

Item Value
gene id XLOC_017516
gene name aig1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 37661229 ~ 37736703 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034810
ACTGAcgtttttttattgtgtgtttttttcttagcaacttacattttaaagcatataATAACTTTATTCGAAAAGAAACGAAATCAATAATCTCAAACCACTGAGCATGCGTGTGTACCAATAACAGGGACAAGCGGctccacacacacagagacagcgATGCTTGTTCCTATAGCAACAGCCTCTCGCGCACATCCGCCGCCTCCAGCCTCGTCTTTACCGGATCCGCGCGgcctctcctcctcctccccacCGCACAGCAGCATCCCTCCGTCGACAGGACATTTCCTCACACGGAAATACGACGGGGGAAGGAAAATGGCGCTCATCCCATCACAGATCCTCAGAGTAGCGATCCTCCTCTCTTATTTTTCCATCCTCTGCAATTACAAAGCCATAGACATGCCCGCGCATCAAACATACGGCGGTAGCTGGAAGTTTCTTACGTTCATAGATTTGGTTATTCAGGCGGTGTTTTTCGGAGTGTGTGTCCTGACTGACCTATCGAGCCTTTTGACAAAAGGCAGCGCCAGTATGGAGCAAGAGAGACAGCTGAGGAAGCTGATTGGCTTACGTGATTGGATGATGGCTGTTCTGGCCTTTCCCGTTGGGGTGTTTGTGGTGACCATGTTCTGGACTCTTTACTTGTACGACAGAGATTTGATTTACCCAAGACTGCTGGACAACTTTATACCTCAGTGGCTAAACCATGGCATGCACACAACAGTTCTTCCTTTCATCATAATTGAGATGAGAACAACACACCACCGGTATCCCAGCAGGCCCTGTGGACTCTTGGCGGTGTGCGCGTTTGCAGTGGGATACGTTGTATGGATGTGCTGGGTGCACAGCATGACGGGGGTGTGGGTTTATCCTCTGCTGGAGCACATTGGGCCCACGGCCAGAATACTCTTCTTCTTCTGCCTCATGGCTCTGATCAATGTCTACTACGTCTTGGGAGAAATTCTGAACAACTACATCTGGGATTCCTCAAAGTGTAAGCATTCTGGAATCAGACAAGACCAAAACTGACTGAGGATCATCACAGACTCTTTTTCTTCCTCTGAGGTCTAATCAGACTTTAACTTCAGTTTAAACcaacataatatatttattttgctctCCTTTTATCTcattttactcaccctcattgATGCCCCTTAACTGAAAAATAAAGCACAGACCTGCATTGGCTTGAACATTAAGTTGAATAATTCATGTATTGAACTTCCGGTATGAATGTTACAGCGTTTCAGAATACCTCAAGCTTTGCGTGATCACTGAATTGTGTGTACTGAACACATGCTGCCGTCACGTGTCCAAAGCCAGTGTTACAAACAACCATACATATTACATATTGCATATATCACTCATGATGGGTGTTATTTACTTAAGAGATGATTTATGGgtattctgtcattatttgcccctgtaaaataaataagcaacacCTTTATATCCACATTGGCATATGGCAAACGACAGTGAGCACAAGGTAATTCAGTGTTTGTGGTCTTTCTGAAgccatatatttttgtttttttaatttttggattAAGCTGAGCTGATAATGCCACATCGTATTCAAACATTGCCAGAAGGGAACGTGACAGGCCTGCCTCAATTTggccacactttacaataagttttcaTTTGTTAGCATTTGCTAACTTGAACTATatgagcaatatatatattttaggcaTTCATTAAACTTTGTAAAtgctaataaatatatttgtttgttttttttaatggttaattgtattttttttatcattatttaaaaatgtatgtattgtttaaaataaagtcTAAGGGGTTTGTtcactcca
>TCONS_00034811
ATGGCGCTCATCCCATCACAGATCCTCAGAGTAGCGATCCTCCTCTCTTATTTTTCCATCCTCTGCAATTACAAAGCCATAGACATGCCCGCGCATCAAACATACGGCGGTAGCTGGAAGTTTCTTACGTTCATAGATTTGGTTATTCAGGCGGTGTTTTTCGGAGTGTGTGTCCTGACTGACCTATCGAGCCTTTTGACAAAAGGCAGCGCCAGTATGGAGCAAGAGAGACAGCTGAGGAAGCTGATTGGCTTACGTGATTGGATGATGGCTGTTCTGGCCTTTCCCGTTGGGGTGTTTGTGGTGACCATGTTCTGGACTCTTTACTTGTACGACAGAGATTTGATTTACCCAAGACTGCTGGACAACTTTATACCTCAGTGGCTAAACCATGGCATGCACACAACAGTTCTTCCTTTCATCATAATTGAGATGAGAACAACACACCACCGGTATCCCAGCAGGCCCTGTGGACTCTTGGCGGTGTGCGCATTTTCTGTGTCTGGCTCTCATAGGATGTGCTGGGTGCACAGCATGACGGGGGTGTGGGTTTATCCTCTGCTGGAGCACATTGGGCCCACGGCCAGAATACTCTTCTTCTTCTGCCTCATGGCTCTGATCAATGTCTACTACGTCTTGGGAGAAATTCTGAACAACTACATCTGGGATTCCTCAAAGTGTAAGTTAAAgccaaaactagactag

Function

symbol description
aig1 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endomembrane system. Orthologous to human AIG1 (androgen induced 1).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041014-358 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endomembrane system. Orthologous to human AIG1 (androgen induced 1).

Ensembl:

ensembl_id ENSDARG00000007171

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034810 False 1835 mRNA 0.42 6 37661229 37736703
TCONS_00034811 True 705 mRNA 0.48 6 37661547 37732901

Neighbor

gene id symbol gene type direction distance location
XLOC_017515 NA coding upstream 56104 37495088 ~ 37605125 (+)
XLOC_017514 adgrg6 coding upstream 191589 37383034 ~ 37469640 (+)
XLOC_017513 vta1 coding upstream 281651 37300296 ~ 37379578 (+)
XLOC_017512 cx23 coding upstream 362955 37294112 ~ 37298274 (+)
XLOC_017511 BX855623.1 coding upstream 380447 37256654 ~ 37280782 (+)
XLOC_017517 pex3 coding downstream 23790 37760493 ~ 37769303 (+)
XLOC_017518 atf3 coding downstream 57930 37794633 ~ 37800737 (+)
XLOC_017519 tatdn3 coding downstream 84287 37820990 ~ 37827383 (+)
XLOC_017520 NA coding downstream 99423 37836126 ~ 37842006 (+)
XLOC_017521 flvcr1 coding downstream 107332 37844035 ~ 37862535 (+)
XLOC_017510 NA non-coding upstream 453856 36925790 ~ 37207373 (+)
XLOC_017509 NA non-coding upstream 750278 36860737 ~ 36910951 (+)
XLOC_017508 NA non-coding upstream 809933 36845114 ~ 36851296 (+)
XLOC_017524 NA non-coding downstream 391351 38128054 ~ 38138423 (+)
XLOC_017530 NA non-coding downstream 636969 38373672 ~ 38447247 (+)
XLOC_017534 NA non-coding downstream 853805 38590508 ~ 38598879 (+)
XLOC_017538 BX511178.1 non-coding downstream 1038269 38774972 ~ 38775087 (+)

Expression


Co-expression Network