XLOC_019976 (si:dkey-1b17.9)


Basic Information

Item Value
gene id XLOC_019976
gene name si:dkey-1b17.9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1708760 ~ 1713309 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039829
CTCTTGGGATGACGTCAGCACTGACGCGTTCattcagcgtcgagtcttcagagctgagCTCTGCCGCCATCAGTGAAGGACgaagacagagtttattgaaggacagtgagaagatgagtgatccagaaccctgcacaattaaacaggaagagactgaagaactaatag

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-546 No description available

Ensembl:

ensembl_id ENSDARG00000115890

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039829 True 168 mRNA 0.48 2 1708760 1713309

Neighbor

gene id symbol gene type direction distance location
XLOC_019975 znf1154 coding upstream 4094 1700552 ~ 1704666 (+)
XLOC_019974 znf1160 coding upstream 10582 1691293 ~ 1698178 (+)
XLOC_019973 si:dkey-1b17.6 coding upstream 21590 1680628 ~ 1687170 (+)
XLOC_019972 si:dkey-1b17.5 coding upstream 33250 1668471 ~ 1675510 (+)
XLOC_019971 NA coding upstream 43289 1660187 ~ 1665471 (+)
XLOC_019977 BX649416.3 coding downstream 12259 1725568 ~ 1732110 (+)
XLOC_019978 znf1159 coding downstream 21672 1734981 ~ 1738040 (+)
XLOC_019979 znf1169 coding downstream 38331 1751640 ~ 1757459 (+)
XLOC_019980 znf1178 coding downstream 54650 1767959 ~ 1773733 (+)
XLOC_019981 znf1154 coding downstream 66092 1779401 ~ 1783013 (+)
XLOC_019970 BX649416.2 non-coding upstream 54822 1650128 ~ 1653938 (+)
XLOC_019963 AL954741.1 non-coding upstream 131014 1576863 ~ 1577746 (+)
XLOC_019947 BX322657.1 non-coding upstream 324691 1377331 ~ 1384069 (+)
XLOC_019944 NA non-coding upstream 343899 1316752 ~ 1364861 (+)
XLOC_019991 BX640576.1 non-coding downstream 164838 1878147 ~ 1880670 (+)
XLOC_020000 NA non-coding downstream 293932 2007241 ~ 2290657 (+)
XLOC_020006 BX640537.2 non-coding downstream 446730 2160039 ~ 2163446 (+)
XLOC_020007 BX640537.1 non-coding downstream 462548 2175857 ~ 2178463 (+)

Expression


Co-expression Network