XLOC_019979 (znf1169)


Basic Information

Item Value
gene id XLOC_019979
gene name znf1169
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1751640 ~ 1757459 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039832
CTCGCCGTGATGACGTCAGCGCTGACGCGTTCACTCAGCGTCaagtcttcagagctgagCTccatcagtgaaagacaaagacagagtttattgaaggacagtgagaagatgagtgatccagaaccctgcagaattaaacaggaagagactgaagaactaatagATGTGATGGTGAAGGAGGAAGaactgagtgaagatgaggagaaacatcatgtcaagaGTGAAGATGAAACTCAAATGAAGATCGAGCATAGTTTATCAACGGAAGGAACAGCCGTAAGAgatttcacctgcactcagtgtggaaggaCTCTAGCCTCCATGTTCGATCTCAGgcatcacatgatgatccacactggagagaaaccgtacaagtgttcgcACTGCGACAAGAGCTTCAATCGTTTAGGAACCCTAAAAACACACATGCTgctccacaccggagagaaaacacacacatgtgaGCAATGCGGCAAGTCATTTTTGAGGGCTGGAGACCTGAAGAAACATCTCCGAGTTCACACAGAGAGGAAGCCTTATTCATGCTCTGAGTGCGGAAGGAGGTTTTCGATGCAGAGCAATTTAACAGCGCACCAGAAGATCCATAGTGGcgtgagagagtttgtgtgctGTGAGTgcgagaagacttttattacagcggTAGACTTGAGACGACACCAGAGGAGTCACACTGaggagaaaccgtacaagtgtttaCACTGCGACAAAACGTTCAGATATTCGGGACATCTGAAAGTCCACCTGAttatccacactggagagaggccgttcatatgcactcagtgtggaaatgGTTTCAAGCGATCAACgcaccttaatcgacacatgaagattcacactcCCTTTGTCTCACATGAGGATGAACACTGGAGAGAAGACACACAGATGTGATCG

Function

symbol description
znf1169 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-786 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000112141

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039832 True 915 mRNA 0.47 3 1751640 1757459

Neighbor

gene id symbol gene type direction distance location
XLOC_019978 znf1159 coding upstream 13600 1734981 ~ 1738040 (+)
XLOC_019977 BX649416.3 coding upstream 19530 1725568 ~ 1732110 (+)
XLOC_019976 si:dkey-1b17.9 coding upstream 38331 1708760 ~ 1713309 (+)
XLOC_019975 znf1154 coding upstream 46974 1700552 ~ 1704666 (+)
XLOC_019974 znf1160 coding upstream 53462 1691293 ~ 1698178 (+)
XLOC_019980 znf1178 coding downstream 10500 1767959 ~ 1773733 (+)
XLOC_019981 znf1154 coding downstream 21942 1779401 ~ 1783013 (+)
XLOC_019982 znf1154 coding downstream 28771 1786230 ~ 1794873 (+)
XLOC_019983 znf1179 coding downstream 38598 1796057 ~ 1800444 (+)
XLOC_019984 znf1168 coding downstream 48776 1806235 ~ 1809533 (+)
XLOC_019971 NA non-coding upstream 86169 1660187 ~ 1665471 (+)
XLOC_019970 BX649416.2 non-coding upstream 97702 1650128 ~ 1653938 (+)
XLOC_019963 AL954741.1 non-coding upstream 173894 1576863 ~ 1577746 (+)
XLOC_019947 BX322657.1 non-coding upstream 367571 1377331 ~ 1384069 (+)
XLOC_019991 BX640576.1 non-coding downstream 120688 1878147 ~ 1880670 (+)
XLOC_020000 NA non-coding downstream 249782 2007241 ~ 2290657 (+)
XLOC_020006 BX640537.2 non-coding downstream 402580 2160039 ~ 2163446 (+)
XLOC_020007 BX640537.1 non-coding downstream 418398 2175857 ~ 2178463 (+)
XLOC_020013 NA non-coding downstream 479693 2237152 ~ 2239093 (+)

Expression


Co-expression Network