XLOC_022503


Basic Information

Item Value
gene id XLOC_022503
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 33378523 ~ 33383864 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045056
GTGCGCGCGCTCCCTACAGTCCGGCAGAGGCGCCACCCCGCGCCGCGCTCCCGCCTCTGCTAGGGGCGCGCCCGTTGCTGCACTTATGGATTCATCCTTGCAGCTGCATGATAAACCTTGAGGGGTTGAGGAAGATCAGGGGGGCGTCTCCGTAACCCACCTTACTTACTAATGCAGGTGCCAAGGGACGAGCGCAGAGTGGAGCGGAGGAGTGTGTCTGCCGAACACATGACTGCTGGAGACTCTGAGGAGACAACAGTAAAGAAAGAGAGGAAGTCACGTTGGGGACAATCTTAAGATGTGTCCCTCCCTAAAAAAATCCTCCATGTGGCTGGAGGTCAGGAACATTGCATAACTCTGTTTAGACCCCGGCTATTGTTTCAGCAGAGCGGGCTTCCTTTCCTGACAGAGTAAAATATAACAACACTACGACTAATTTTGAGAGCTTTTCAGACTCCTGTTCCACTCTTCAATCTACAATAACAGAACAACAAGatgtaataaat
>TCONS_00045055
GTGCGCGCGCTCCCTACAGTCCGGCAGAGGCGCCACCCCGCGCCGCGCTCCCGCCTCTGCTAGGGGCGCGCCCGTTGCTGCACTTATGGATTCATCCTTGCAGGGACGAGCGCAGAGTGGAGCGGAGGAGTGTGTCTGCCGAACACATGACTGCTGGAGACTCTGAGGAGACAACAGTAAAGAAAGAGAGGAAGTCACGTTGGGGACAATCTTAAGATGTGTCCCTCCCTAAAAAAATCCTCCATGTGGCTGGAGGTCAGGAACATTGCATAACTCTGTTTAGACCCCGGCTATTGTTTCAGCAGAGCGGGCTTCCTTTCCTGACAGAGTAAAATATAACAACACTACGACTAATTTTGAGAGCTTTTCAGACTCCTGTTCCACTCTTCAATCTACAATAACAGAACAACAAGatgtaataaat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045056 False 506 lncRNA 0.52 4 33378523 33383864
TCONS_00045055 True 424 lncRNA 0.51 3 33378523 33383864

Neighbor

gene id symbol gene type direction distance location
XLOC_022502 slc48a1a coding downstream 17098 33357163 ~ 33361425 (-)
XLOC_022501 si:ch211-226m16.2 coding downstream 27533 33337734 ~ 33350990 (-)
XLOC_022499 NA coding downstream 41669 33232978 ~ 33336854 (-)
XLOC_022500 AL929087.2 coding downstream 77104 33301304 ~ 33301419 (-)
XLOC_022498 AL929087.1 coding downstream 159395 33219005 ~ 33219128 (-)
XLOC_022504 NA coding upstream 22910 33406774 ~ 33442342 (-)
XLOC_022505 itga5 coding upstream 63761 33447625 ~ 33558161 (-)
XLOC_022506 NA coding upstream 224145 33608009 ~ 33618846 (-)
XLOC_022507 csrnp2 coding upstream 249377 33633241 ~ 33680265 (-)
XLOC_022508 pou6f1 coding upstream 297813 33681677 ~ 33710029 (-)
XLOC_022497 BX470150.1 non-coding downstream 502863 32875546 ~ 32875660 (-)
XLOC_022495 NA non-coding downstream 841973 32496311 ~ 32536550 (-)
XLOC_022509 NA non-coding upstream 347325 33731189 ~ 33739111 (-)
XLOC_022513 CT025912.1 non-coding upstream 585002 33968866 ~ 33968988 (-)
XLOC_022515 NA non-coding upstream 1383457 34767321 ~ 34768151 (-)

Expression


Co-expression Network