G378008


Basic Information

Item Value
gene id G378008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21065505 ~ 21067811 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU429667
GGAATCTGCATTGGAAGTATCAATTTGATGTTCATGAACATTAACCCCAAATTCTTCATCTTCTGTGGAATGTCTCTGCATTATCCACAGGGTAACTGTCAACTTGTGAGCAATGTTCGCTACTGTGGCTATTTCCTCATAATGTAGGCAGACTGACCTACCATAAAAAACTATGAAGAaaggcaaaactgctccagctccttcaagttggatgggttcctgctggtgtacagcaatctataagtcataccacagattctcaattggattgaggtctgggctttaactaggccattccaagtaatttaaatgtttccccttaaaccactcaagtgttgctttagcagtatgcttagggtcattgtcctgctggaaggtgaacctccatcccagtctcaaatctctggaagactgaaacaggtttccctcaagaatttccctgtatttagcgccatccatcattccttcaattctgaccagtttcccagtccctgccaatgaaaaacatccccacagcatgatgctgccaccaccatgcttcactgtggggatggtgttctcagggtgatgacaggtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429667 True 578 lncRNA 0.44 2 21065505 21067811

Neighbor

gene id symbol gene type direction distance location
LOC110523399 LOC106568557 coding downstream 46539 21007681 ~ 21018966 (-)
LOC110523394 LOC100194676 coding downstream 214281 20843391 ~ 20851224 (-)
LOC110523392 NA coding downstream 1013663 20044243 ~ 20051842 (-)
LOC110523381 LOC106568667 coding downstream 1239971 19621025 ~ 19825534 (-)
LOC110523387 LOC106562971 coding downstream 1447436 19590144 ~ 19618069 (-)
LOC110522820 LOC105889199 coding upstream 92470 21160281 ~ 21162494 (-)
LOC110523403 ubb coding upstream 104833 21172644 ~ 21175591 (-)
tpst2 LOC106568446 coding upstream 108337 21176148 ~ 21182983 (-)
LOC110522821 LOC106568453 coding upstream 115876 21183687 ~ 21271783 (-)
LOC110522822 myo18b coding upstream 222355 21290166 ~ 21353241 (-)
G378000 NA non-coding downstream 16981 21048225 ~ 21048524 (-)
G377995 NA non-coding downstream 29677 21033897 ~ 21035828 (-)
G377987 NA non-coding downstream 42154 21022879 ~ 21023351 (-)
G377978 NA non-coding downstream 58203 21006718 ~ 21007302 (-)
G378025 NA non-coding upstream 18916 21086727 ~ 21110446 (-)
G378030 NA non-coding upstream 31037 21098848 ~ 21100271 (-)
G378043 NA non-coding upstream 43938 21111749 ~ 21112557 (-)
G378044 NA non-coding upstream 51684 21119495 ~ 21131747 (-)
G378055 NA non-coding upstream 91332 21159143 ~ 21160097 (-)
G377991 NA other downstream 35722 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 360365 20704613 ~ 20705140 (-)
G377800 NA other downstream 370797 20694096 ~ 20694708 (-)
G374786 NA other downstream 2506338 18558140 ~ 18559167 (-)
G374189 NA other downstream 3062335 18002820 ~ 18003170 (-)
G378359 NA other upstream 723851 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 1109454 22177265 ~ 22179322 (-)
jmy LOC106568093 other upstream 1731889 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 2479389 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 2641987 23709798 ~ 23711891 (-)

Expression


Co-expression Network