Gene
RNA
| Item | Value |
|---|---|
| gene id | G378157 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21380522 ~ 21381024 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 5, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU429840 | True | 208 | lncRNA | 0.53 | 2 | 21380522 | 21381024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118964573 | NA | coding | downstream | 5465 | 21372625 ~ 21375057 (-) |
| LOC110522822 | myo18b | coding | downstream | 27281 | 21290166 ~ 21353241 (-) |
| LOC110522821 | LOC106568453 | coding | downstream | 108739 | 21183687 ~ 21271783 (-) |
| tpst2 | LOC106568446 | coding | downstream | 197539 | 21176148 ~ 21182983 (-) |
| LOC110523403 | ubb | coding | downstream | 204931 | 21172644 ~ 21175591 (-) |
| LOC110523405 | LOC106568369 | coding | upstream | 79797 | 21460821 ~ 21464192 (-) |
| LOC110523410 | LOC106568355 | coding | upstream | 154904 | 21535928 ~ 21537727 (-) |
| LOC110523418 | LOC106568264 | coding | upstream | 322656 | 21703680 ~ 21734406 (-) |
| LOC118964574 | NA | coding | upstream | 379350 | 21760374 ~ 21766141 (-) |
| LOC110523425 | NA | coding | upstream | 576768 | 21957792 ~ 21959442 (-) |
| G378156 | NA | non-coding | downstream | 357 | 21379589 ~ 21380165 (-) |
| G378124 | NA | non-coding | downstream | 87708 | 21277651 ~ 21292814 (-) |
| G378070 | NA | non-coding | downstream | 112282 | 21265566 ~ 21268240 (-) |
| G378104 | NA | non-coding | downstream | 140729 | 21238435 ~ 21239793 (-) |
| G378158 | NA | non-coding | upstream | 195 | 21381219 ~ 21381592 (-) |
| G378161 | NA | non-coding | upstream | 18569 | 21399593 ~ 21400060 (-) |
| G378164 | NA | non-coding | upstream | 24228 | 21405252 ~ 21494060 (-) |
| G378082 | NA | non-coding | upstream | 34765 | 21415789 ~ 21416126 (-) |
| G378184 | NA | non-coding | upstream | 69495 | 21450519 ~ 21455436 (-) |
| G377991 | NA | other | downstream | 350739 | 21029458 ~ 21029783 (-) |
| G377809 | LOC106568602 | other | downstream | 675382 | 20704613 ~ 20705140 (-) |
| G377800 | NA | other | downstream | 685814 | 20694096 ~ 20694708 (-) |
| G374786 | NA | other | downstream | 2821355 | 18558140 ~ 18559167 (-) |
| G374189 | NA | other | downstream | 3377352 | 18002820 ~ 18003170 (-) |
| G378359 | NA | other | upstream | 410638 | 21791662 ~ 21791993 (-) |
| LOC110523434 | LOC106567989 | other | upstream | 796241 | 22177265 ~ 22179322 (-) |
| jmy | LOC106568093 | other | upstream | 1418676 | 22799696 ~ 22859199 (-) |
| LOC110522831 | LOC106563032 | other | upstream | 2166176 | 23488916 ~ 23556681 (-) |
| G380610 | LOC106567829 | other | upstream | 2328774 | 23709798 ~ 23711891 (-) |
