G378158


Basic Information

Item Value
gene id G378158
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21381219 ~ 21381592 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU429841
GCCCAGTAGGTCACACttcagaggcaggcaggcaggcagctgggTTTAGGGACCGGTAACGATTGCTAGGTATGGTGTGAAGTGAGggagtgagaaatagagaggggagggaggttgatgtgtgtgtgtcagtgtgtttgaaCACTTGAAAgacgaaagagagagatacatgtGATCTGTTGAGGACGAGGttgtcagtgtgacatcactcacaTGACTTGGTTCACTGTTTCACCGTTTCCCACACTGTTTCACCGTTTCCCACACTGTTTCACCGTGTCCCACACTGTTTCACCGTTTCCCTCACTGTTTCACCGTGTCCCACACTGTTTCACCGTTTCCCTCACTGTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429841 True 354 lncRNA 0.50 2 21381219 21381592

Neighbor

gene id symbol gene type direction distance location
LOC118964573 NA coding downstream 6162 21372625 ~ 21375057 (-)
LOC110522822 myo18b coding downstream 27978 21290166 ~ 21353241 (-)
LOC110522821 LOC106568453 coding downstream 109436 21183687 ~ 21271783 (-)
tpst2 LOC106568446 coding downstream 198236 21176148 ~ 21182983 (-)
LOC110523403 ubb coding downstream 205628 21172644 ~ 21175591 (-)
LOC110523405 LOC106568369 coding upstream 79229 21460821 ~ 21464192 (-)
LOC110523410 LOC106568355 coding upstream 154336 21535928 ~ 21537727 (-)
LOC110523418 LOC106568264 coding upstream 322088 21703680 ~ 21734406 (-)
LOC118964574 NA coding upstream 378782 21760374 ~ 21766141 (-)
LOC110523425 NA coding upstream 576200 21957792 ~ 21959442 (-)
G378157 NA non-coding downstream 195 21380522 ~ 21381024 (-)
G378156 NA non-coding downstream 1054 21379589 ~ 21380165 (-)
G378124 NA non-coding downstream 88405 21277651 ~ 21292814 (-)
G378070 NA non-coding downstream 112979 21265566 ~ 21268240 (-)
G378161 NA non-coding upstream 18001 21399593 ~ 21400060 (-)
G378164 NA non-coding upstream 23660 21405252 ~ 21494060 (-)
G378082 NA non-coding upstream 34197 21415789 ~ 21416126 (-)
G378184 NA non-coding upstream 68927 21450519 ~ 21455436 (-)
G378219 NA non-coding upstream 133183 21514775 ~ 21515015 (-)
G377991 NA other downstream 351436 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 676079 20704613 ~ 20705140 (-)
G377800 NA other downstream 686511 20694096 ~ 20694708 (-)
G374786 NA other downstream 2822052 18558140 ~ 18559167 (-)
G374189 NA other downstream 3378049 18002820 ~ 18003170 (-)
G378359 NA other upstream 410070 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 795673 22177265 ~ 22179322 (-)
jmy LOC106568093 other upstream 1418108 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 2165608 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 2328206 23709798 ~ 23711891 (-)

Expression


Co-expression Network