XLOC_002367 (CR396590.5)


Basic Information

Item Value
gene id XLOC_002367
gene name CR396590.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40554917 ~ 40555131 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004487
GATCAGGAGACTCAATACTGCTTTCCTGCAAACTCATCAGGTCATGAAAAAATACTCCACACATTAATATAACTTAACTTTTTTAATAAGGTCAGCATGGACTGTGTTTCTGAACCTGCTGGTAATCATCTCCATTTCTCACCTCAAGAAGCTTCGCAAATCAACAAATATGTTTATTCGCTCTCTGGGTGTAACTGATCTACTTGTTGGCCTTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093961

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004487 True 215 unprocessed_pseudogene 0.38 1 40554917 40555131

Neighbor

gene id symbol gene type direction distance location
XLOC_002366 CR396590.2 coding upstream 3963 40550730 ~ 40550954 (+)
XLOC_002365 si:ch211-238p8.10 coding upstream 5276 40548616 ~ 40549641 (+)
XLOC_002364 NA coding upstream 18391 40535862 ~ 40536526 (+)
XLOC_002363 gltpb coding upstream 225928 40321067 ~ 40328989 (+)
XLOC_002362 git2b coding upstream 237438 40284003 ~ 40317479 (+)
XLOC_002368 taar18h coding downstream 6561 40561692 ~ 40562717 (+)
XLOC_002369 taar18i coding downstream 13604 40568735 ~ 40569766 (+)
XLOC_002370 si:ch211-238p8.18 coding downstream 23201 40578332 ~ 40579363 (+)
XLOC_002371 taar18j coding downstream 28799 40583930 ~ 40584955 (+)
XLOC_002372 taar17a coding downstream 43660 40598791 ~ 40599801 (+)
XLOC_002361 NA non-coding upstream 273915 40122374 ~ 40281002 (+)
XLOC_002359 NA non-coding upstream 637409 39909138 ~ 39917508 (+)
XLOC_002357 NA non-coding upstream 774068 39780561 ~ 39780849 (+)
XLOC_002373 CR396590.8 non-coding downstream 44804 40599935 ~ 40600502 (+)
XLOC_002375 CR396590.7 non-coding downstream 52570 40607701 ~ 40608717 (+)
XLOC_002376 CR396590.3 non-coding downstream 54330 40609461 ~ 40609953 (+)
XLOC_002380 CR396590.1 non-coding downstream 83645 40638776 ~ 40639804 (+)
XLOC_002398 BX001050.2 non-coding downstream 192742 40747873 ~ 40748898 (+)

Expression


Co-expression Network