XLOC_002464 (camk2b2)


Basic Information

Item Value
gene id XLOC_002464
gene name camk2b2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 45071603 ~ 45134581 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004622
ATGGCAACCACAACCTGCACGCGCTTCACCGACGAGTACCAGCTCTACGAGGAGCTCGgaaaAGGGGCTTTCTCCGTGGTGCGCCGATGTGCGAAACTCAGCACGGGTCAGGAATACGCCTCCAAAATCATCAACACCAAGAAGCTCTCAGCTCGAGACCACCAGAAGCTGGAGCGTGAGGCGCGGATCTGCCGTCTGCTAAAACACTCCAACatcgTGCGCCTCCATGACAGTATATCAGAGGAGGGCTTCCACTACCTGCTGTTTGACCTcGTCACAGGTGGAGAGCTGTTTGAAGACATCGTGGCCAGAGAATATTACAGTGAAGCGGACGCCAGTCTGATATGTGCATTAACATTCTTCTTtagcccacacaaacacacacactgtcacaACCACATAtttacacgcgcacacacacacacacacacacacacaccaactaaCCAACATACGcgcatatttacacacacatacatacacaactaa
>TCONS_00004623
ATGGCAACCACAACCTGCACGCGCTTCACCGACGAGTACCAGCTCTACGAGGAGCTCGgaaaAGGGGCTTTCTCCGTGGTGCGCCGATGTGCGAAACTCAGCACGGGTCAGGAATACGCCTCCAAAATCATCAACACCAAGAAGCTCTCAGCTCGAGACCACCAGAAGCTGGAGCGTGAGGCGCGGATCTGCCGTCTGCTAAAACACTCCAACatcgTGCGCCTCCATGACAGTATATCAGAGGAGGGCTTCCACTACCTGCTGTTTGACCTcGTCACAGGTGGAGAGCTGTTTGAAGACATCGTGGCCAGAGAATATTACAGTGAAGCGGACGCCAGTCATTGCATCCAGCAGATCCTGGAGGCGGTGCTTCACTGCCATCAGATGGGCGTGGTCCACCGAGACCTCAAGCCGGAGAACCTGCTCTTGGCCAGTAAATGCAAGAATGCCGCCGTCAAGTTGGCAGATTTTGGTCTGGCCATCGAAGTACAGGGAGACCAGCAGGCCTGGTTCGGATTTGCTGGAACGCCGGGTTATCTTTCTCCAGAGGTGCTCCGGAAAGAAGCGTATGGGAAGCCGGTGGACATTTGGGCGTGTGgagtCATCCTCTACATCCTGCTGGTGGGCTATCCTCCATTCTGGGATGAAGACCAGCACAAACTCTACCAGCAGATCAAGGCTGGAGCGTATGACTTTCCCTCCCCGGAGTGGGACACGGTCACCCCTGAAGCCAAAAACCTCATCAATCAGATGCTGACCATCAACCCGGTCAAGAGAATCACAGCGCAGGAGGCTCTCAAACACCCGTGGGTCTGCCAACGCTCCACCGTGGCGTCGATGATGCACAGACAGGAGACAGTCGAGTGCCTGAAGAAGTTTAACGCCAGACGGAAACTCAAGGGAGCCATACTGACCACCATGCTGGTGTCGCGCAACTTCTCCG
>TCONS_00004624
cGTCACAGGTGGAGAGCTGTTTGAAGACATCGTGGCCAGAGAATATTACAGTGAAGCGGACGCCAGTCATTGCATCCAGCAGATCCTGGAGGCGGTGCTTCACTGCCATCAGATGGGCGTGGTCCACCGAGACCTCAAGCCGGAGAACCTGCTCTTGGCCAGTAAATGCAAGAATGCCGCCGTCAAGTTGGCAGATTTTGGTCTGGCCATCGAAGTACAGGGAGACCAGCAGGCCTGGTTCGGATTTGCTGGAACGCCGGGTTATCTTTCTCCAGAGGTGCTCCGGAAAGAAGCGTATGGGAAGCCGGTGGACATTTGGGCGTGTGgagtCATCCTCTACATCCTGCTGGTGGGCTATCCTCCATTCTGGGATGAAGACCAGCACAAACTCTACCAGCAGATCAAGGCTGGAGCGTATGACTTTCCCTCCCCGGAGTGGGACACGGTCACCCCTGAAGCCAAAAACCTCATCAATCAGATGCTGACCATCAACCCGGTCAAGAGAATCACAGCGCAGGAGGCTCTCAAACACCCGTGGGTCTGCCAACGCTCCACCGTGGCGTCGATGATGCACAGACAGGAGACAGTCGAGTGCCTGAAGAAGTTTAACGCCAGACGGAAACTCAAGGGAGCCATACTGACCACCATGCTGGTGTCGCGCAACTTCTCCGCCAAGAGTCTGCTCAACAAGAAGACTGAAGTCAAGCCTCAGTCTCAGTCAAACAGTGTGAAGAGCAGCAGCGTCTCCAGTCCTAAAGGAAGTGTTCCTCCTCCTGCTCTGgAGCCTCAGACCACTGTTATTCATAATCCAGTGGATGGGATAAAGGAATCTTCCGACAGCAGCAACACAACCATCGAGGATGAAGACGTCAGAGCACGCAAGCAGGAGATCATCAAGATCACGGAGCAGCTGATAGAAGGCCTCAATAATGGAGACTTTGAGGCCTATGCGAAAATGTGTGACCCAGGGCTGACGTCTTTCGAACCCGAGGCTCTGGGGAACCTGGTGGAGGGAATGGACTTCCACAGATTTTACTTTGAGAACTCGCTTTCCAAGAACAGTAAACCGATCCACACCACCATCCTGAACCCTCATGTGCACCTGATTGGTGAAGATGGCGCCTGCATCGCCTACATCCGCCTGACACAGTTTGTGGATGGCCAGGGCCTCCCacgcagcagccaatcagaggagaCGCGGGTGTGGCACCGCCGGGAATCCAGATGGCAGAACATTCACTTCCACTGCTCCGGCGCTCCAGCGGCTCCTCTGCAGTGAAG
>TCONS_00004625
gAGCCTCAGACCACTGTTATTCATAATCCAGTGGATGGGATAAAGGAATCTTCCGACAGCAGCAACACAACCATCGAGGATGAAGACGTCAGAGCACGCAAGCAGGAGATCATCAAGATCACGGAGCAGCTGATAGAAGGCCTCAATAATGGAGACTTTGAGGCCTATGCGAAAATGTGTGACCCAGGGCTGACGTCTTTCGAACCCGAGGCTCTGGGGAACCTGGTGGAGGGAATGGACTTCCACAGATTTTACTTTGAGAACTCGCTTTCCAAGAACAGTAAACCGATCCACACCACCATCCTGAACCCTCATGTGCACCTGATTGGTGAAGATGGCGCCTGCATCGCCTACATCCGCCTGACACAGTTTGTGGATGGCCAGGGCCTCCCacgcagcagccaatcagaggagaCGCGGGTGTGGCACCGCCGGGAATCCAGATGGCAGAACATTCACTTCCACTGCTCCGGCGCTCCAGCGGCTCCTCTGCAG

Function

symbol description
camk2b2 Enables calmodulin-dependent protein kinase activity. Acts upstream of or within embryonic pectoral fin morphogenesis; heart jogging; and protein autophosphorylation. Predicted to be active in cytoplasm and neuron projection. Is expressed in brain; pectoral fin; pericardial region; somite; and tail bud.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100089

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004622 False 489 mRNA 0.51 6 45071603 45092225
TCONS_00004623 False 943 mRNA 0.56 12 45071603 45105381
TCONS_00004624 False 1281 mRNA 0.55 15 45089820 45134581
TCONS_00004625 True 495 mRNA 0.55 5 45128375 45134576

Neighbor

gene id symbol gene type direction distance location
XLOC_002463 nudcd3 coding upstream 1421 45059702 ~ 45070182 (+)
XLOC_002462 gnsb coding upstream 24361 45031398 ~ 45047242 (+)
XLOC_002461 h2az2b coding upstream 73151 44984946 ~ 44998452 (+)
XLOC_002460 il1b coding upstream 106827 44955106 ~ 44964776 (+)
XLOC_002459 cnnm4a coding upstream 129372 44940693 ~ 44942231 (+)
XLOC_002465 NA coding downstream 6363 45140944 ~ 45145137 (+)
XLOC_002466 ogdhb coding downstream 13424 45148005 ~ 45205893 (+)
XLOC_002467 CT956056.1 coding downstream 103375 45237956 ~ 45238042 (+)
XLOC_002468 zmiz2 coding downstream 113745 45248326 ~ 45341821 (+)
XLOC_002469 ppiab coding downstream 210993 45345574 ~ 45352279 (+)
XLOC_002457 NA non-coding upstream 154204 44913607 ~ 44917399 (+)
XLOC_002456 BX569788.2 non-coding upstream 163720 44907768 ~ 44907883 (+)
XLOC_002453 BX569788.1 non-coding upstream 302082 44767388 ~ 44769521 (+)
XLOC_002447 NA non-coding upstream 688144 44380982 ~ 44383459 (+)
XLOC_002445 NA non-coding upstream 873392 44055749 ~ 44198211 (+)
XLOC_002470 NA non-coding downstream 221122 45355703 ~ 45356324 (+)

Expression


Co-expression Network