RNA id: TCONS_00004625



Basic Information


Item Value
RNA id TCONS_00004625
length 495
RNA type mRNA
GC content 0.55
exon number 5
gene id XLOC_002464
representative True

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 45071603 ~ 45134581 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


gAGCCTCAGACCACTGTTATTCATAATCCAGTGGATGGGATAAAGGAATCTTCCGACAGCAGCAACACAACCATCGAGGATGAAGACGTCAGAGCACGCAAGCAGGAGATCATCAAGATCACGGAGCAGCTGATAGAAGGCCTCAATAATGGAGACTTTGAGGCCTATGCGAAAATGTGTGACCCAGGGCTGACGTCTTTCGAACCCGAGGCTCTGGGGAACCTGGTGGAGGGAATGGACTTCCACAGATTTTACTTTGAGAACTCGCTTTCCAAGAACAGTAAACCGATCCACACCACCATCCTGAACCCTCATGTGCACCTGATTGGTGAAGATGGCGCCTGCATCGCCTACATCCGCCTGACACAGTTTGTGGATGGCCAGGGCCTCCCacgcagcagccaatcagaggagaCGCGGGTGTGGCACCGCCGGGAATCCAGATGGCAGAACATTCACTTCCACTGCTCCGGCGCTCCAGCGGCTCCTCTGCAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000164805

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00005950 lncRNA upstream 210976 44913607 ~ 44917399 (+) True XLOC_002457
TCONS_00004606 lncRNA upstream 358854 44767388 ~ 44769521 (+) True XLOC_002453
TCONS_00005949 lncRNA upstream 744916 44380982 ~ 44383459 (+) True XLOC_002447
TCONS_00005948 lncRNA upstream 1071071 44055749 ~ 44057304 (+) False XLOC_002445
TCONS_00004582 lncRNA upstream 1103724 43993352 ~ 44024651 (+) True XLOC_002442
TCONS_00005951 lncRNA downstream 6368 45140944 ~ 45145137 (+) True XLOC_002465
TCONS_00005952 lncRNA downstream 221127 45355703 ~ 45356324 (+) True XLOC_002470
TCONS_00004623 mRNA upstream 22994 45071603 ~ 45105381 (+) False XLOC_002464
TCONS_00004622 mRNA upstream 36150 45071603 ~ 45092225 (+) False XLOC_002464
TCONS_00004621 mRNA upstream 58193 45059702 ~ 45070182 (+) True XLOC_002463
TCONS_00004620 mRNA upstream 81133 45031398 ~ 45047242 (+) True XLOC_002462
TCONS_00004618 mRNA upstream 129923 44984946 ~ 44998452 (+) False XLOC_002461
TCONS_00004626 mRNA downstream 13429 45148005 ~ 45203196 (+) False XLOC_002466
TCONS_00004627 mRNA downstream 13591 45148167 ~ 45205893 (+) False XLOC_002466
TCONS_00004630 mRNA downstream 113750 45248326 ~ 45322706 (+) False XLOC_002468
TCONS_00004631 mRNA downstream 167849 45302425 ~ 45341821 (+) True XLOC_002468
TCONS_00004632 mRNA downstream 210998 45345574 ~ 45352279 (+) True XLOC_002469
TCONS_00004611 other upstream 220492 44907768 ~ 44907883 (+) True XLOC_002456
TCONS_00004603 other upstream 414558 44699817 ~ 44713817 (+) False XLOC_002452
TCONS_00004569 other upstream 2055119 43037133 ~ 43073256 (+) False XLOC_002435
TCONS_00004540 other upstream 3288342 41839919 ~ 41840033 (+) True XLOC_002414
TCONS_00004521 other upstream 4379477 40747873 ~ 40748898 (+) True XLOC_002398
TCONS_00004628 other downstream 41844 45176420 ~ 45176924 (+) True XLOC_002466
TCONS_00004629 other downstream 103380 45237956 ~ 45238042 (+) True XLOC_002467

Expression Profile


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