XLOC_026557 (ighv4-9)


Basic Information

Item Value
gene id XLOC_026557
gene name ighv4-9
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34084861 ~ 34085336 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051739
TGCTTCTGATTGGATCAGGATCATTTACATGAGCAGCTTCAAGATGAAGAATGCCCTCTGCTTACTGCTGCTCTCATTCAGTTTACAGCGTATAAAATGTCAAAGTATGGAGTCGATTGAAAGCTCAGTTCAGAGAAAGCTTGGAGAAACTCTGACTCTATCATGTAGAGGATCGGGGTTCAGCTTTAGCTACTATAACATGCACTGGATCAGACAACAAGCTGGAAAACCTCTTGTGTGGATTGGACGTGTTTATGACAGCACTGACTATAGCTATGCTGAATCCTTCAAAAGTAGAGCTGAAATCACCCGAGATAATTCAAAGAGTATGACTTATCTGAAACTATCAGGCCTGACAGCAGAAGATTCAGCCGTGTATTACTGCGCAAGACAAT

Function

symbol description
ighv4-9 Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096326

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051739 True 395 mRNA 0.42 2 34084861 34085336

Neighbor

gene id symbol gene type direction distance location
XLOC_026556 ighv4-3 coding downstream 474 34081851 ~ 34084387 (-)
XLOC_026555 ighv5-8 coding downstream 3838 34080570 ~ 34081023 (-)
XLOC_026553 ighv6-2 coding downstream 6682 34074278 ~ 34078179 (-)
XLOC_026554 ighv7-1 coding downstream 8054 34076378 ~ 34076807 (-)
XLOC_026552 ighv8-2 coding downstream 12415 34072012 ~ 34072446 (-)
XLOC_026558 BX649502.11 coding upstream 705 34086041 ~ 34086483 (-)
XLOC_026559 ighv4-8 coding upstream 1612 34086948 ~ 34087394 (-)
XLOC_026560 ighv4-7 coding upstream 4647 34089983 ~ 34090456 (-)
XLOC_026561 si:dkey-204f11.13 coding upstream 5964 34091300 ~ 34091356 (-)
XLOC_026562 ighv4-6 coding upstream 7122 34092458 ~ 34092914 (-)
XLOC_026547 BX649502.5 non-coding downstream 19925 34063955 ~ 34064936 (-)
XLOC_026544 BX649502.10 non-coding downstream 26144 34058679 ~ 34058717 (-)
XLOC_026539 BX649502.4 non-coding downstream 36208 34048205 ~ 34048653 (-)
XLOC_026538 BX649502.6 non-coding downstream 37245 34047179 ~ 34047616 (-)
XLOC_026534 BX649502.8 non-coding downstream 49230 34035192 ~ 34035631 (-)
XLOC_026572 NA non-coding upstream 54301 34139637 ~ 34141181 (-)
XLOC_026580 NA non-coding upstream 555712 34641048 ~ 34641973 (-)
XLOC_026585 NA non-coding upstream 862066 34947402 ~ 34948061 (-)
XLOC_026588 NA non-coding upstream 1479792 35565128 ~ 35574451 (-)

Expression


Co-expression Network